RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 STAT3P40763 770 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 LRCH2Q5VUJ6 765 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 ARHGEF26Q96DR7 871 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 ANKRD27Q96NW4 1050 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 SERPINB12Q96P63 405 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 RPS6KC1Q96S38 1066 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 MTUS1Q9ULD2 1270 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 ARL2BPQ9Y2Y0 163 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
CACNA1A-220ENST00000635988 MYO3BQ8WXR4 1341 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 PASKQ96RG2 1323 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 FMO5P49326 533 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 ALDH5A1P51649 535 aaPredicted RBP15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 RHBDL3P58872 404 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 MKRN3Q13064 507 aaKnown RBP15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 AP3B2Q13367 1082 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 KCTD19Q17RG1 926 aaPredicted RBP15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 CCDC137Q6PK04 289 aaKnown RBP15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 ART4Q93070 314 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 VTI1AQ96AJ9 217 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 ANO3Q9BYT9 981 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 THAP2Q9H0W7 228 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 L3MBTL1Q9Y468 752 aa15.96■□□□□ 0.14
CACNA1A-220ENST00000635988 IGF2BP3O00425 579 aaKnown RBP eCLIP15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 SLCO1A2P46721 670 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 KCNJ2P63252 427 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 LACTBP83111 547 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 SPIRE1Q08AE8 756 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 KIF22Q14807 665 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 CYP1B1Q16678 543 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 EXOC3L1Q86VI1 746 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 ZSWIM1Q9BR11 485 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 MTFR1LQ9H019 292 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 ARHGEF3Q9NR81 526 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 TMOD4Q9NZQ9 345 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 PCDHA3Q9Y5H8 950 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 LIN7AO14910 233 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 CLIC2O15247 247 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 GJB6O95452 261 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 FGFR4P22455 802 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 SKIV2L2P42285 1042 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 LMNB2Q03252 620 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 BZW1Q7L1Q6 419 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 TRIM7Q9C029 511 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 WNT8AQ9H1J5 351 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 RXFP1Q9HBX9 757 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 APEX2Q9UBZ4 518 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 CDK5RAP2Q96SN8 1893 aa15.95■□□□□ 0.14
CACNA1A-220ENST00000635988 TCP11X1B4DZS4 312 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 SPATA31C1P0DKV0 1188 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 PSMC6P62333 389 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 ATP11AP98196 1134 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 CALCOCO2Q13137 446 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 PPP2R5AQ15172 486 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 ETNPPLQ8TBG4 499 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 CNKSR1Q969H4 720 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 SEPT11Q9NVA2 429 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 CTTNBP2NLQ9P2B4 639 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 COG5Q9UP83 839 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 COL5A3P25940 1745 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 TGFB1I1O43294 461 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 LUC7L3O95232 432 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 GABPAQ06546 454 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 SPATA21Q7Z572 469 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 CCDC105Q8IYK2 499 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 ARHGEF2Q92974 986 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 FAM20AQ96MK3 541 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 FGFR1OP2Q9NVK5 253 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 NARFQ9UHQ1 456 aa15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 DBR1Q9UK59 544 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-220ENST00000635988 ARFGEF1Q9Y6D6 1849 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 GAKO14976 1311 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L15C9J2P7 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L10C9JJH3 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L13C9JLJ4 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L11C9JVI0 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L18D6R9N7 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L22D6RA61 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L17D6RBQ6 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L19D6RCP7 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L20D6RJB6 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 MEIS1O00470 390 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 AKR1B1P15121 316 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 COILP38432 576 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 CCNG1P51959 295 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L24Q0WX57 530 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 SF3A3Q12874 501 aaKnown RBP eCLIP15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 Q4G0T1 1027 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 NUGGCQ68CJ6 796 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 TTBK2Q6IQ55 1244 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 USP17L6PQ6QN14 398 aa15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 DPP8Q6V1X1 898 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-220ENST00000635988 UHMK1Q8TAS1 419 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms