RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 NOSTRINQ8IVI9 506 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 CMTM4Q8IZR5 234 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 OR5AN1Q8NGI8 311 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 SLC7A14Q8TBB6 771 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 UBXN4Q92575 508 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 ANKS1AQ92625 1134 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 GMLQ99445 158 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 CPPED1Q9BRF8 314 aaPredicted RBP3.81□□□□□ -1.8
CHD2-203ENST00000625243 HIRIP3Q9BW71 556 aaPredicted RBP3.81□□□□□ -1.8
CHD2-203ENST00000625243 AKIP1Q9NQ31 210 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 TRPM5Q9NZQ8 1165 aa3.81□□□□□ -1.8
CHD2-203ENST00000625243 RNASET2O00584 256 aaKnown RBP3.8□□□□□ -1.8
CHD2-203ENST00000625243 NCR1O76036 304 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 STK10O94804 968 aaKnown RBP3.8□□□□□ -1.8
CHD2-203ENST00000625243 POU3F3P20264 500 aaPredicted RBP3.8□□□□□ -1.8
CHD2-203ENST00000625243 GTF2F1P35269 517 aaKnown RBP eCLIP3.8□□□□□ -1.8
CHD2-203ENST00000625243 FAM214AQ32MH5 1076 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 IQSEC1Q6DN90 963 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 FSTL4Q6MZW2 842 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 CISD2Q8N5K1 135 aaKnown RBP3.8□□□□□ -1.8
CHD2-203ENST00000625243 LILRA3Q8N6C8 439 aaPredicted RBP3.8□□□□□ -1.8
CHD2-203ENST00000625243 Q8N9P0 234 aaPredicted RBP3.8□□□□□ -1.8
CHD2-203ENST00000625243 PTPRN2Q92932 1015 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 ARMC5Q96C12 935 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 WDR92Q96MX6 357 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 FOXB1Q99853 325 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 TINF2Q9BSI4 451 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 TLK1Q9UKI8 766 aa3.8□□□□□ -1.8
CHD2-203ENST00000625243 R3HCC1Q9Y3T6 440 aaKnown RBP3.8□□□□□ -1.8
CHD2-203ENST00000625243 DAPK3O43293 454 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 RBMXL2O75526 392 aaKnown RBP3.79□□□□□ -1.8
CHD2-203ENST00000625243 RASGRP1O95267 797 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 IGLV2-14P01704 120 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 NAT1P18440 290 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 SDHAP31040 664 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 APOBEC3AP31941 199 aaPredicted RBP3.79□□□□□ -1.8
CHD2-203ENST00000625243 ZNF81P51508 661 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 CATSPEREQ5SY80 951 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 CELF2-AS1Q8N7Q2 184 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 DLG3Q92796 817 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 FOXRED1Q96CU9 486 aaPredicted RBP3.79□□□□□ -1.8
CHD2-203ENST00000625243 NDC1Q9BTX1 674 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 PCDHA9Q9Y5H5 950 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 B3GALT1Q9Y5Z6 326 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 SHROOM4Q9ULL8 1493 aa3.79□□□□□ -1.8
CHD2-203ENST00000625243 PIPSLA2A3N6 862 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 HOXA3O43365 443 aaPredicted RBP3.78□□□□□ -1.8
CHD2-203ENST00000625243 MATN4O95460 622 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 HOXB6P17509 224 aaKnown RBP3.78□□□□□ -1.8
CHD2-203ENST00000625243 KIR2DL3P43628 341 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 RGS3P49796 1198 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 GDF7Q7Z4P5 450 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 GRASPQ7Z6J2 395 aaPredicted RBP3.78□□□□□ -1.8
CHD2-203ENST00000625243 RTN4RL1Q86UN2 441 aaPredicted RBP3.78□□□□□ -1.8
CHD2-203ENST00000625243 LRRC47Q8N1G4 583 aaKnown RBP3.78□□□□□ -1.8
CHD2-203ENST00000625243 CAGE1Q8TC20 777 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 ZNF384Q8TF68 577 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 DYDC2Q96IM9 177 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 ZNF778Q96MU6 729 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 EPC1Q9H2F5 836 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 C14orf93Q9H972 538 aaKnown RBP3.78□□□□□ -1.8
CHD2-203ENST00000625243 DNAI1Q9UI46 699 aa3.78□□□□□ -1.8
CHD2-203ENST00000625243 GAGE12BA1L429 117 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 GAGE12HA6NDE8 117 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 ESRRBO95718 433 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 HNRNPLP14866 589 aaKnown RBP eCLIP3.77□□□□□ -1.81
CHD2-203ENST00000625243 SLC6A3Q01959 620 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 GUCY1B3Q02153 619 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 NHLH1Q02575 133 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 ROM1Q03395 351 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 RBL2Q08999 1139 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 VPS72Q15906 364 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 BEAN1Q3B7T3 259 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 METTL24Q5JXM2 366 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 BRAPQ7Z569 592 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 C1QL2Q7Z5L3 287 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 CKAP2LQ8IYA6 745 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 OR52N2Q8NGI0 321 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 WASF1Q92558 559 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 DCLRE1CQ96SD1 692 aaKnown RBP3.77□□□□□ -1.81
CHD2-203ENST00000625243 DUSP26Q9BV47 211 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 C1QTNF7Q9BXJ2 289 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 CPEB1Q9BZB8 566 aaKnown RBP3.77□□□□□ -1.81
CHD2-203ENST00000625243 KIAA1586Q9HCI6 787 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 ALG13Q9NP73 1137 aaKnown RBP3.77□□□□□ -1.81
CHD2-203ENST00000625243 POLR3BQ9NW08 1133 aaPredicted RBP3.77□□□□□ -1.81
CHD2-203ENST00000625243 KCMF1Q9P0J7 381 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 DKK2Q9UBU2 259 aa3.77□□□□□ -1.81
CHD2-203ENST00000625243 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.77□□□□□ -1.81
CHD2-203ENST00000625243 UNC119BA6NIH7 251 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 ZFPL1O95159 310 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 BMPR1AP36894 532 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 MPLP40238 635 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 BLOC1S1P78537 153 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 DDR2Q16832 855 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 ABHD17BQ5VST6 288 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 FAM83AQ86UY5 434 aa3.76□□□□□ -1.81
CHD2-203ENST00000625243 GLB1L3Q8NCI6 653 aaPredicted RBP3.76□□□□□ -1.81
CHD2-203ENST00000625243 CPEB3Q8NE35 698 aaKnown RBP3.76□□□□□ -1.81
CHD2-203ENST00000625243 SLC9A6Q92581 669 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms