RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 ZIM3Q96PE6 472 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 AGPAT1Q99943 283 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ZWILCHQ9H900 591 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ABT1Q9ULW3 272 aaKnown RBP8.93□□□□□ -0.98
ALMS1-208ENST00000620466 RAD51CO43502 376 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ANXA13P27216 316 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 TROAPQ12815 778 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 MTMR1Q13613 665 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 CDKAL1Q5VV42 579 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF449Q6P9G9 518 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 CCDC137Q6PK04 289 aaKnown RBP8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ADGRA1Q86SQ6 560 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 SLC35G2Q8TBE7 412 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 REEP2Q9BRK0 252 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 TRIM51Q9BSJ1 452 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ANKZF1Q9H8Y5 726 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 EHD2Q9NZN4 543 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 RAD17O75943 681 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 MT-ND3P03897 115 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF18P17022 549 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 RXRBP28702 533 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 ABCD1P33897 745 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 JAK3P52333 1124 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 IL1RL1Q01638 556 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 MMEL1Q495T6 779 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 TRIM65Q6PJ69 517 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 CLEC10AQ8IUN9 316 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 GCNAQ96QF7 691 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 WNT8AQ9H1J5 351 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 SCINQ9Y6U3 715 aa8.93□□□□□ -0.98
ALMS1-208ENST00000620466 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 EYA4O95677 639 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 FGFR4P22455 802 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF543Q08ER8 600 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 RNPC3Q96LT9 517 aaKnown RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 LXNQ9BS40 222 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MSTO1Q9BUK6 570 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MLXIPLQ9NP71 852 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 RICTORQ6R327 1708 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF233A6NK53 670 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 H3BQF6 201 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 TTI1O43156 1089 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ECE2O60344 883 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.986e-6■■■■□ 25.8
ALMS1-208ENST00000620466 TBX2Q13207 712 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 DHX34Q14147 1143 aaKnown RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 TAF11Q15544 211 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 PKN1Q16512 942 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF772Q68DY9 489 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 CENPUQ71F23 418 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 OR2W6PQ8NHA6 318 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MASTLQ96GX5 879 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 LRGUKQ96M69 825 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ZNF341Q9BYN7 854 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 TRPC5Q9UL62 973 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 EMSYQ7Z589 1322 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MED7O43513 233 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 FGFR2P21802 821 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 TFAMQ00059 246 aaKnown RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 RPAINQ86UA6 219 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 TTC30AQ86WT1 665 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MAP7D3Q8IWC1 876 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 LRRC43Q8N309 656 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 DCLK2Q8N568 766 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ERGIC2Q96RQ1 377 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 PITPNM3Q9BZ71 974 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 TDRD3Q9H7E2 651 aaKnown RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 F5H6K3 240 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 CPP00450 1065 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 PDHBP11177 359 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 KLRC3Q07444 240 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 LRRC14Q15048 493 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 SEC23AQ15436 765 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 SCYL3Q8IZE3 742 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ECT2Q9H8V3 914 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 FEM1BQ9UK73 627 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 NUB1Q9Y5A7 615 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MON2Q7Z3U7 1717 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 SPDYE2BA6NHP3 402 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 MAPK13O15264 365 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 SPDYE6P0CI01 402 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 UCHL3P15374 230 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 ITPK1Q13572 414 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 PDE1CQ14123 709 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 EPM2AIP1Q7L775 607 aaPredicted RBP8.92□□□□□ -0.98
ALMS1-208ENST00000620466 BBS5Q8N3I7 341 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 HSPH1Q92598 858 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 GINM1Q9NU53 330 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 RGL1Q9NZL6 768 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 SEL1LQ9UBV2 794 aa8.92□□□□□ -0.98
ALMS1-208ENST00000620466 OPHN1O60890 802 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 PPP1R37O75864 691 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 TJP3O95049 919 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 PEX19P40855 299 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 CARSP49589 748 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SARSP49591 514 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 COG7P83436 770 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 LRRC31Q6UY01 552 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms