RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 WDFY4Q6ZS81 3184 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 CNTNAP2Q9UHC6 1331 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 CYP3A7-CYP3A51PA0A087WV96 503 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-214ENST00000580073 C2orf71A6NGG8 1288 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 GAS2O43903 313 aaKnown RBP14.98□□□□□ -0.01
TRAF4-214ENST00000580073 PSMD10O75832 226 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 CDKL5O76039 1030 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 CYP3A7P24462 503 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 PBX3P40426 434 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 PHKA2P46019 1235 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 BCAR1P56945 870 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 PSMC5P62195 406 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 RBM10P98175 930 aaKnown RBP14.98□□□□□ -0.01
TRAF4-214ENST00000580073 NONOQ15233 471 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAF4-214ENST00000580073 UGCGQ16739 394 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 SYCE2Q6PIF2 218 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 CATSPER4Q7RTX7 472 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 KRT25Q7Z3Z0 450 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 BLIDQ8IZY5 108 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 PLCD3Q8N3E9 789 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 TDRD5Q8NAT2 981 aaKnown RBP14.98□□□□□ -0.01
TRAF4-214ENST00000580073 PRSS33Q8NF86 280 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 ZBP1Q9H171 429 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 FAM105AQ9NUU6 356 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 IRAK3Q9Y616 596 aa14.98□□□□□ -0.01
TRAF4-214ENST00000580073 GCFC2P16383 781 aaKnown RBP14.97□□□□□ -0.01
TRAF4-214ENST00000580073 ANKRD1Q15327 319 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 KIAA1841Q6NSI8 718 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 DDX53Q86TM3 631 aaKnown RBP14.97□□□□□ -0.01
TRAF4-214ENST00000580073 RHPN2Q8IUC4 686 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 VPS52Q8N1B4 723 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 GTF3C6Q969F1 213 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 ASIC4Q96FT7 647 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 EMILIN2Q9BXX0 1053 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 SLKQ9H2G2 1235 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-214ENST00000580073 SUCLA2Q9P2R7 463 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-214ENST00000580073 DDX25Q9UHL0 483 aaKnown RBP14.97□□□□□ -0.01
TRAF4-214ENST00000580073 LIMCH1Q9UPQ0 1083 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 PLXNA3P51805 1871 aa14.97□□□□□ -0.01
TRAF4-214ENST00000580073 A0A087WZ62 844 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 IGKV6-21A0A0C4DH24 114 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 CCDC194A0A1B0GVG4 234 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 CLASP2O75122 1294 aaKnown RBP14.96□□□□□ -0.01
TRAF4-214ENST00000580073 MAFO75444 373 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-214ENST00000580073 CTSAP10619 480 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 FDPSP14324 419 aaKnown RBP14.96□□□□□ -0.01
TRAF4-214ENST00000580073 RFC5P40937 340 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 NOMO2Q5JPE7 1267 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 ATAT1Q5SQI0 421 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 KREMEN2Q8NCW0 462 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 TCP11Q8WWU5 503 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 ZNF668Q96K58 619 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-214ENST00000580073 FAM20AQ96MK3 541 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 NLRP4Q96MN2 994 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 AIFM3Q96NN9 605 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 FAM193BQ96PV7 902 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-214ENST00000580073 FDXACB1Q9BRP7 624 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-214ENST00000580073 APOL5Q9BWW9 433 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 SFXN1Q9H9B4 322 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 KANSL3Q9P2N6 904 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 DPP7Q9UHL4 492 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 DBR1Q9UK59 544 aaKnown RBP14.96□□□□□ -0.01
TRAF4-214ENST00000580073 USTQ9Y2C2 406 aa14.96□□□□□ -0.01
TRAF4-214ENST00000580073 ST18O60284 1047 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 JAK2O60674 1132 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 ZNF623O75123 536 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 TDP2O95551 362 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 CXCL14O95715 111 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 FGFR4P22455 802 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 SP100P23497 879 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-214ENST00000580073 QARSP47897 775 aaKnown RBP14.95□□□□□ -0.02
TRAF4-214ENST00000580073 PCBP1Q15365 356 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRAF4-214ENST00000580073 CABP7Q86V35 215 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 CNNM3Q8NE01 707 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 ETNPPLQ8TBG4 499 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 PSPC1Q8WXF1 523 aaKnown RBP14.95□□□□□ -0.02
TRAF4-214ENST00000580073 ACSF2Q96CM8 615 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-214ENST00000580073 IGSF21Q96ID5 467 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 MBOAT7Q96N66 472 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 POMKQ9H5K3 350 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 AGPAT5Q9NUQ2 364 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 TBC1D13Q9NVG8 400 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 SSX2IPQ9Y2D8 614 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 INPP5FQ9Y2H2 1132 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 COL4A3BPQ9Y5P4 624 aa14.95□□□□□ -0.02
TRAF4-214ENST00000580073 DDX11L8A8MPP1 907 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 TBX3O15119 743 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 MARCH6O60337 910 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 ERLIN2O94905 339 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 AVPR2P30518 371 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 PPP2R5CQ13362 524 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 RARS2Q5T160 578 aaKnown RBP14.94□□□□□ -0.02
TRAF4-214ENST00000580073 B3GNT9Q6UX72 402 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 CCDC149Q6ZUS6 474 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 SRGAP1Q7Z6B7 1085 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 CCDC83Q8IWF9 413 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 ZDHHC14Q8IZN3 488 aa14.94□□□□□ -0.02
TRAF4-214ENST00000580073 NSUN7Q8NE18 718 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms