RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 DDX1Q92499 740 aaKnown RBP12.68□□□□□ -0.38
GGA3-206ENST00000578773 STAMQ92783 540 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 ZSCAN10Q96SZ4 725 aaPredicted RBP12.68□□□□□ -0.38
GGA3-206ENST00000578773 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 OSBPL6Q9BZF3 934 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 TBC1D13Q9NVG8 400 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 ATG2BQ96BY7 2078 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 MEIS2O14770 477 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
GGA3-206ENST00000578773 CLCN3P51790 818 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 AFF1P51825 1210 aaKnown RBP12.67□□□□□ -0.38
GGA3-206ENST00000578773 ACTR2P61160 394 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 SATB1Q01826 763 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 BMS1Q14692 1282 aaKnown RBP12.67□□□□□ -0.38
GGA3-206ENST00000578773 STPG1Q5TH74 334 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 C19orf48Q6RUI8 117 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 POTEHQ6S545 545 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
GGA3-206ENST00000578773 CELF5Q8N6W0 485 aaKnown RBP12.67□□□□□ -0.38
GGA3-206ENST00000578773 GIMAP8Q8ND71 665 aaPredicted RBP12.67□□□□□ -0.38
GGA3-206ENST00000578773 ESR2Q92731 530 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 GPRASP2Q96D09 838 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 GPATCH3Q96I76 525 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
GGA3-206ENST00000578773 INPP5FQ9Y2H2 1132 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 NUP205Q92621 2012 aa12.67□□□□□ -0.38
GGA3-206ENST00000578773 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
GGA3-206ENST00000578773 F8W810 466 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 DDHD2O94830 711 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 C22orf31O95567 290 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 ATP4AP20648 1035 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 RPS9P46781 194 aaKnown RBP12.66□□□□□ -0.38
GGA3-206ENST00000578773 STAT5BP51692 787 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 LIMK1P53667 647 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 GAS6Q14393 721 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 PLA2G2FQ9BZM2 168 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 NT5C3AQ9H0P0 336 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 ADAMTS10Q9H324 1103 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 AZI2Q9H6S1 392 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 PIDD1Q9HB75 910 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 JPH1Q9HDC5 661 aaPredicted RBP12.66□□□□□ -0.38
GGA3-206ENST00000578773 HEBP1Q9NRV9 189 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 C2orf42Q9NWW7 574 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 SLC9A2Q9UBY0 812 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 UBIAD1Q9Y5Z9 338 aa12.66□□□□□ -0.38
GGA3-206ENST00000578773 ZMYM6O95789 1325 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 VWA8A3KMH1 1905 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 A0A0U1RQF3 1178 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 AXIN1O15169 862 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 MAGEA9P43362 315 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 AK2P54819 239 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 MTMR1Q13613 665 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 TCEAL6Q6IPX3 200 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 TRMT1LQ7Z2T5 733 aaKnown RBP12.65□□□□□ -0.38
GGA3-206ENST00000578773 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 TCEAL3Q969E4 200 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 LSM14BQ9BX40 385 aaKnown RBP12.65□□□□□ -0.38
GGA3-206ENST00000578773 MRPL9Q9BYD2 267 aaKnown RBP12.65□□□□□ -0.38
GGA3-206ENST00000578773 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
GGA3-206ENST00000578773 ARRDC1-AS1Q9H2J1 176 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 RIOX1Q9H6W3 641 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.65□□□□□ -0.38
GGA3-206ENST00000578773 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
GGA3-206ENST00000578773 NRG2O14511 850 aaPredicted RBP12.64□□□□□ -0.39
GGA3-206ENST00000578773 PAPLNO95428 1278 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 CCNE2O96020 404 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 GLUD1P00367 558 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 FSHRP23945 695 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 NLRP11P59045 1033 aaKnown RBP12.64□□□□□ -0.39
GGA3-206ENST00000578773 ADCY1Q08828 1119 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 ZNF252P-AS1Q0IIN9 211 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 ITGB3BPQ13352 177 aaPredicted RBP12.64□□□□□ -0.39
GGA3-206ENST00000578773 UBE2SQ16763 222 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 ODR4Q5SWX8 454 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 HEATR6Q6AI08 1181 aaKnown RBP12.64□□□□□ -0.39
GGA3-206ENST00000578773 GRASPQ7Z6J2 395 aaPredicted RBP12.64□□□□□ -0.39
GGA3-206ENST00000578773 CCDC60Q8IWA6 550 aaPredicted RBP12.64□□□□□ -0.39
GGA3-206ENST00000578773 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 ITFG1Q8TB96 612 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 SCNM1Q9BWG6 230 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 CHRDQ9H2X0 955 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 MRPL17Q9NRX2 175 aaKnown RBP12.64□□□□□ -0.39
GGA3-206ENST00000578773 MARCH5Q9NX47 278 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 UNC79Q9P2D8 2635 aa12.64□□□□□ -0.39
GGA3-206ENST00000578773 KALRNO60229 2985 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
GGA3-206ENST00000578773 NOVA1P51513 510 aaKnown RBP12.63□□□□□ -0.39
GGA3-206ENST00000578773 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
GGA3-206ENST00000578773 SEC23AQ15436 765 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 KIAA1211LQ6NV74 962 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 LRRC71Q8N4P6 559 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 METTL13Q8N6R0 699 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 FGF13Q92913 245 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms