RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 GLULP15104 373 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 MCM5P33992 734 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 AK2P54819 239 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 VARS2Q5ST30 1063 aaKnown RBP18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 SMAP1Q8IYB5 467 aaPredicted RBP18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 CMASQ8NFW8 434 aaPredicted RBP18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 NXPE3Q969Y0 559 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 FAM167AQ96KS9 214 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 GCOM2Q9BZD3 368 aaPredicted RBP18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 CLUHO75153 1309 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 EVPLQ92817 2033 aa18.39■□□□□ 0.53
CTDNEP1-211ENST00000575783 SPTBN2O15020 2390 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 IGLV3-22A0A075B6J6 115 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 INPPL1O15357 1258 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 B4GALT3O60512 393 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 LILRB3O75022 631 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 RFPL2O75678 378 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 ALDH2P05091 517 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 SKIP12755 728 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 SDHBP21912 280 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 AP3B2Q13367 1082 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 JAKMIP3Q5VZ66 844 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 MICU3Q86XE3 530 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 MAML2Q8IZL2 1156 aaPredicted RBP18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 RSPH1Q8WYR4 309 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 SMG7Q92540 1137 aaKnown RBP18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 TMEM87BQ96K49 555 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 MTA3Q9BTC8 594 aa18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 PIN4Q9Y237 131 aaKnown RBP18.38■□□□□ 0.53
CTDNEP1-211ENST00000575783 CACNA1GO43497 2377 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 OATP04181 439 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 SPATA31D3P0C874 917 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 CHMLP26374 656 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 LIFRP42702 1097 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 COL9A3Q14050 684 aaPredicted RBP18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 KIAA0319Q5VV43 1072 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 PPP1R18Q6NYC8 613 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 ELMSAN1Q6PJG2 1045 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 SPATA31D4Q6ZUB0 917 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 PJA1Q8NG27 643 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 LRRC2Q9BYS8 371 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 PIDD1Q9HB75 910 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 FAM105AQ9NUU6 356 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 SPATA6Q9NWH7 488 aaPredicted RBP18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 STK39Q9UEW8 545 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 FAN1Q9Y2M0 1017 aa18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
CTDNEP1-211ENST00000575783 DCDC2BA2VCK2 349 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 ZNF862O60290 1169 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 DDHD2O94830 711 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 URODP06132 367 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 LAMP2P13473 410 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 SFPQP23246 707 aaKnown RBP eCLIP18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 DRP2Q13474 957 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 ST3GAL2Q16842 350 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 CYP26C1Q6V0L0 522 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 TAS1R1Q7RTX1 841 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 TEX2Q8IWB9 1127 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 URGCPQ8TCY9 931 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 MAP4K1Q92918 833 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 FAM193BQ96PV7 902 aaPredicted RBP18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 TRAIPQ9BWF2 469 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 DPP7Q9UHL4 492 aa18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 CDV3Q9UKY7 258 aaKnown RBP18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 RBM8AQ9Y5S9 174 aaKnown RBP18.36■□□□□ 0.53
CTDNEP1-211ENST00000575783 DENND4AQ7Z401 1863 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 A0A087WZ62 844 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 TEX28O15482 410 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 LAMTOR5O43504 91 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 GLUD1P00367 558 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 ADH1AP07327 375 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 AFF1P51825 1210 aaKnown RBP18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 PRKCEQ02156 737 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 CSTF1Q05048 431 aaKnown RBP18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 GET4Q7L5D6 327 aaPredicted RBP18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 GPR161Q8N6U8 529 aaKnown RBP18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 ATRIPQ8WXE1 791 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 SHDQ96IW2 340 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 RPS6KC1Q96S38 1066 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 FDXACB1Q9BRP7 624 aaPredicted RBP18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 NUMBLQ9Y6R0 609 aa18.35■□□□□ 0.53
CTDNEP1-211ENST00000575783 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 NRP1O14786 923 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 ZNF623O75123 536 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 CYP3A4P08684 503 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 CDC42EP1Q00587 391 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 SNW1Q13573 536 aaKnown RBP18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 PRR16Q569H4 304 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 CATSPER4Q7RTX7 472 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 SECISBP2LQ93073 1101 aaKnown RBP18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 ZNF707Q96C28 371 aaPredicted RBP18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 PGBD4Q96DM1 585 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 BCO2Q9BYV7 579 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 GLT8D2Q9H1C3 349 aa18.34■□□□□ 0.53
CTDNEP1-211ENST00000575783 SLC2A4RGQ9NR83 387 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms