RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 USP8P40818 1118 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 PPATQ06203 517 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 RSBN1LQ6PCB5 846 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-212ENST00000573126 ARHGEF19Q8IW93 802 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
RPAIN-212ENST00000573126 LARSQ9P2J5 1176 aaKnown RBP12.16□□□□□ -0.46
RPAIN-212ENST00000573126 ATP8B3O60423 1300 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 DDX3YO15523 660 aaKnown RBP12.15□□□□□ -0.46
RPAIN-212ENST00000573126 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.46
RPAIN-212ENST00000573126 INPP5BP32019 993 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 LSP1P33241 339 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 MAGEA9P43362 315 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 DGKZQ13574 1117 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 AADACL2Q6P093 401 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 CCDC26Q8TAB7 109 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 ALG3Q92685 438 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 KAT5Q92993 513 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 LRRC45Q96CN5 670 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 RIT2Q99578 217 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 SLITRK6Q9H5Y7 841 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 ACP6Q9NPH0 428 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 GPRC5CQ9NQ84 441 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 FAM169AQ9Y6X4 670 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
RPAIN-212ENST00000573126 CCDC172P0C7W6 258 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 MYZAPP0CAP1 466 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 MUTP22033 750 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 CAP2P40123 477 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 SEC24CP53992 1094 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.47
RPAIN-212ENST00000573126 FAM160B2Q86V87 743 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.15□□□□□ -0.472e-7■■■■■ 32.7
RPAIN-212ENST00000573126 ERVK-5Q9HDB9 667 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 BCCIPQ9P287 314 aaKnown RBP eCLIP12.15□□□□□ -0.47
RPAIN-212ENST00000573126 FEM1BQ9UK73 627 aa12.15□□□□□ -0.47
RPAIN-212ENST00000573126 UTP11Q9Y3A2 253 aaKnown RBP12.15□□□□□ -0.47
RPAIN-212ENST00000573126 ANKRD62A6NC57 917 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 TMEM110-MUSTN1A8MSY1 372 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 HMGB1P1B2RPK0 211 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 H0YGN5 161 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 BCRP11274 1271 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 RARRES1P49788 294 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 VAMP7P51809 220 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 ZNF844Q08AG5 666 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 SLC9A9Q8IVB4 645 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 EIF1ADQ8N9N8 165 aaKnown RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 GLG1Q92896 1179 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 AGPAT1Q99943 283 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 ZNF341Q9BYN7 854 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 TMBIM4Q9HC24 238 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 ZNF277Q9NRM2 450 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 NFS1Q9Y697 457 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 COL2A1P02458 1487 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 ZNF646O15015 1829 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 ZNF536O15090 1300 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 GOLGA8IPA6NC78 632 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 GOLGA8JA6NMD2 632 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 DHX15O43143 795 aaKnown RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 CLSTN1O94985 981 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 FTLP02792 175 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 P4HBP07237 508 aaKnown RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 DHX9Q08211 1270 aaKnown RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 SPP2Q13103 211 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 KIF22Q14807 665 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 INTS8Q75QN2 995 aaKnown RBP12.14□□□□□ -0.47
RPAIN-212ENST00000573126 TMC3Q7Z5M5 1100 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 PLEKHO2Q8TD55 490 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 CTTNBP2NLQ9P2B4 639 aa12.14□□□□□ -0.47
RPAIN-212ENST00000573126 MYO1FO00160 1098 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 SLC16A4O15374 487 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 ICAM1P05362 532 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 ALAS1P13196 640 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 MARCKSL1P49006 195 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 HSD17B4P51659 736 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 POU5F1Q01860 360 aaKnown RBP12.13□□□□□ -0.47
RPAIN-212ENST00000573126 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 KRT35Q92764 455 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 CARD9Q9H257 536 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 LRRC4CQ9HCJ2 640 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 HSPBP1Q9NZL4 362 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 ALG6Q9Y672 507 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-212ENST00000573126 EIF2AK2P19525 551 aaKnown RBP12.13□□□□□ -0.47
RPAIN-212ENST00000573126 LIG3P49916 1009 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 PEX3P56589 373 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 MRPS9P82933 396 aaKnown RBP12.13□□□□□ -0.47
RPAIN-212ENST00000573126 CETN1Q12798 172 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 UGCGQ16739 394 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 C1orf220Q5T0J3 134 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 HAUS6Q7Z4H7 955 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 RPUSD2Q8IZ73 545 aaKnown RBP12.13□□□□□ -0.47
RPAIN-212ENST00000573126 SUPT20HQ8NEM7 779 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 ELMO3Q96BJ8 720 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 TMEM206Q9H813 350 aa12.13□□□□□ -0.47
RPAIN-212ENST00000573126 ATP8A1Q9Y2Q0 1164 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms