RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 PLSCR1O15162 318 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 GGPS1O95749 300 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 TM4SF1P30408 202 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 ZNF543Q08ER8 600 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 ZNF568Q3ZCX4 644 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 POTEEQ6S8J3 1075 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 BZW1Q7L1Q6 419 aaKnown RBP16.92■□□□□ 0.3
COMMD4-215ENST00000566843 KIRREL3Q8IZU9 778 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 COG5Q9UP83 839 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 FRMPD4Q14CM0 1322 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 SYNGAP1Q96PV0 1343 aa16.92■□□□□ 0.3
COMMD4-215ENST00000566843 ANKRD62A6NC57 917 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 SMIM23A6NLE4 172 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 MIF4GDA9UHW6 222 aaKnown RBP16.91■□□□□ 0.3
COMMD4-215ENST00000566843 COPS2P61201 443 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 IRX1P78414 480 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-215ENST00000566843 SPIRE1Q08AE8 756 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 ZKSCAN8Q15776 578 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-215ENST00000566843 NFIL3Q16649 462 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 EXOC3L1Q86VI1 746 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 CATSPER3Q86XQ3 398 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 ART4Q93070 314 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 C18orf8Q96DM3 657 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 ZNF570Q96NI8 536 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 GPR88Q9GZN0 384 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 PSTPIP2Q9H939 334 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 ARHGEF3Q9NR81 526 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 HOMER3Q9NSC5 361 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 COL24A1Q17RW2 1714 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 O00370 1275 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 IGF2BP3O00425 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
COMMD4-215ENST00000566843 KIF3CO14782 793 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 GJB6O95452 261 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 PLCG2P16885 1265 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 STAT3P40763 770 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 IFNAR2P48551 515 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 DRAP1Q14919 205 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-215ENST00000566843 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 C11orf63Q6NUN7 778 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 MOXD1Q6UVY6 613 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 LRRC47Q8N1G4 583 aaKnown RBP16.91■□□□□ 0.3
COMMD4-215ENST00000566843 RUNDC3BQ96NL0 473 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 PLCD4Q9BRC7 762 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 DNAJC12Q9UKB3 198 aa16.91■□□□□ 0.3
COMMD4-215ENST00000566843 SUN1O94901 812 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 KRT13P13646 458 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 ABCB4P21439 1286 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 CCNG1P51959 295 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 RHBDL3P58872 404 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 PSMC6P62333 389 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 SF3A3Q12874 501 aaKnown RBP eCLIP16.9■□□□□ 0.3
COMMD4-215ENST00000566843 CYP1B1Q16678 543 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 LRCH2Q5VUJ6 765 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 TTC27Q6P3X3 843 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 ASRGL1Q7L266 308 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 RHOT2Q8IXI1 618 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 SLC5A4Q9NY91 659 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-215ENST00000566843 LIN7AO14910 233 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-215ENST00000566843 SPATA31C1P0DKV0 1188 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-215ENST00000566843 C15orf52Q6ZUT6 534 aaKnown RBP16.9■□□□□ 0.3
COMMD4-215ENST00000566843 ZDHHC14Q8IZN3 488 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 THAP2Q9H0W7 228 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 GLT8D2Q9H1C3 349 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 PRKAG3Q9UGI9 489 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 DBR1Q9UK59 544 aaKnown RBP16.9■□□□□ 0.3
COMMD4-215ENST00000566843 DNM3Q9UQ16 869 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 ALG6Q9Y672 507 aa16.9■□□□□ 0.3
COMMD4-215ENST00000566843 ZBTB5O15062 677 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 TGFB1I1O43294 461 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 FGFR4P22455 802 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 RPA1P27694 616 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 TRMT10CQ7L0Y3 403 aaKnown RBP16.89■□□□□ 0.29
COMMD4-215ENST00000566843 CYFIP1Q7L576 1253 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 IFT74Q96LB3 600 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 ARL2BPQ9Y2Y0 163 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 TNFAIP3P21580 790 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 SLCO1A2P46721 670 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 FMO5P49326 533 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 PABPC4Q13310 644 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■□□□ 13.1
COMMD4-215ENST00000566843 KIF22Q14807 665 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 CDCA2Q69YH5 1023 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-215ENST00000566843 AADACL2Q6P093 401 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 UBL4BQ8N7F7 174 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 ERMNQ8TAM6 284 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 ETNPPLQ8TBG4 499 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 KLHL29Q96CT2 875 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 FAM163AQ96GL9 167 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-215ENST00000566843 FGFR1OP2Q9NVK5 253 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 TAS2R14Q9NYV8 317 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 PCDHB13Q9Y5F0 798 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
COMMD4-215ENST00000566843 TCP11X1B4DZS4 312 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms