RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TTC9BQ8N6N2 239 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 NEIL1Q96FI4 390 aaPredicted RBP6.72□□□□□ -1.33
LINC00254-201ENST00000563416 LOXL4Q96JB6 756 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 LRRC37BQ96QE4 947 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 POLR3BQ9NW08 1133 aaPredicted RBP6.72□□□□□ -1.33
LINC00254-201ENST00000563416 NCANO14594 1321 aa6.72□□□□□ -1.33
LINC00254-201ENST00000563416 HECW2Q9P2P5 1572 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 AKNAQ7Z591 1439 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 PRRG2O14669 202 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 BRINP1O60477 761 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 UBR7Q8N806 425 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 GIMAP8Q8ND71 665 aaPredicted RBP6.71□□□□□ -1.34
LINC00254-201ENST00000563416 CHST13Q8NET6 341 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 DYDC2Q96IM9 177 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 HIST1H2AHQ96KK5 128 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 HIST1H2AJQ99878 128 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 PITHD1Q9GZP4 211 aaPredicted RBP6.71□□□□□ -1.34
LINC00254-201ENST00000563416 MTG2Q9H4K7 406 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 NOC2LQ9Y3T9 749 aaKnown RBP6.71□□□□□ -1.34
LINC00254-201ENST00000563416 KIDINS220Q9ULH0 1771 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 ADGRL1O94910 1474 aa6.71□□□□□ -1.34
LINC00254-201ENST00000563416 GPATCH8Q9UKJ3 1502 aaKnown RBP6.71□□□□□ -1.34
LINC00254-201ENST00000563416 BCORL1Q5H9F3 1711 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 POGZQ7Z3K3 1410 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 ABCA6Q8N139 1617 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.7□□□□□ -1.34
LINC00254-201ENST00000563416 NEMP1O14524 444 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 VIL1P09327 827 aaKnown RBP6.7□□□□□ -1.34
LINC00254-201ENST00000563416 CR2P20023 1033 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 BROXQ5VW32 411 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 BCL6BQ8N143 479 aaPredicted RBP6.7□□□□□ -1.34
LINC00254-201ENST00000563416 WDR92Q96MX6 357 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 SSBP3Q9BWW4 388 aaPredicted RBP6.7□□□□□ -1.34
LINC00254-201ENST00000563416 C12orf65Q9H3J6 166 aaKnown RBP6.7□□□□□ -1.34
LINC00254-201ENST00000563416 SMPD4Q9NXE4 827 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 MAGEL2Q9UJ55 1249 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 OAZ3Q9UMX2 235 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 DENND4BO75064 1496 aaPredicted RBP6.7□□□□□ -1.34
LINC00254-201ENST00000563416 LRRC9Q6ZRR7 1453 aa6.7□□□□□ -1.34
LINC00254-201ENST00000563416 INO80Q9ULG1 1556 aaPredicted RBP6.69□□□□□ -1.34
LINC00254-201ENST00000563416 CROCC2H7BZ55 1655 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 ADAMTSL3P82987 1691 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 ADGBQ8N7X0 1667 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 A0A0A6YYJ9 748 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 GPR42O15529 346 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 DAPK3O43293 454 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 KDM1AO60341 852 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 CDC14BO60729 498 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 OPHN1O60890 802 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 SESN3P58005 492 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 ADAM15Q13444 863 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 MAN2A1Q16706 1144 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 RNF187Q5TA31 235 aaPredicted RBP6.69□□□□□ -1.34
LINC00254-201ENST00000563416 PRRT2Q7Z6L0 340 aaPredicted RBP6.69□□□□□ -1.34
LINC00254-201ENST00000563416 RASSF3Q86WH2 238 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 AFAP1L2Q8N4X5 818 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 GCDHQ92947 438 aaPredicted RBP6.69□□□□□ -1.34
LINC00254-201ENST00000563416 ZNF496Q96IT1 587 aaPredicted RBP6.69□□□□□ -1.34
LINC00254-201ENST00000563416 PTPN18Q99952 460 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 NOL10Q9BSC4 688 aaKnown RBP6.69□□□□□ -1.34
LINC00254-201ENST00000563416 HAPLN2Q9GZV7 340 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 WNT8AQ9H1J5 351 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 CTDP1Q9Y5B0 961 aaPredicted RBP6.69□□□□□ -1.34
LINC00254-201ENST00000563416 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 REREQ9P2R6 1566 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
LINC00254-201ENST00000563416 NCOA2Q15596 1464 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 ZNF518AQ6AHZ1 1483 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 MAGI2Q86UL8 1455 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 FER1L4A9Z1Z3 1794 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 ZFYVE16Q7Z3T8 1539 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 SYCP2Q9BX26 1530 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 RPS19P39019 145 aaKnown RBP6.68□□□□□ -1.34
LINC00254-201ENST00000563416 ANTXR2P58335 489 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 TBR1Q16650 682 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 UNQ6494/PRO21346Q6UXR6 183 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 HDGFL2Q7Z4V5 671 aaPredicted RBP6.68□□□□□ -1.34
LINC00254-201ENST00000563416 TAX1BP1Q86VP1 789 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 CDYL2Q8N8U2 506 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 OR14K1Q8NGZ2 314 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 SLC7A6OSQ96CW6 309 aaPredicted RBP6.68□□□□□ -1.34
LINC00254-201ENST00000563416 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 PCDHB6Q9Y5E3 794 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 DIP2CQ9Y2E4 1556 aa6.68□□□□□ -1.34
LINC00254-201ENST00000563416 ARHGEF12Q9NZN5 1544 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 PMS2P1A4D2B8 440 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 ELL2O00472 640 aaPredicted RBP6.67□□□□□ -1.34
LINC00254-201ENST00000563416 FSBPO95073 299 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 PCDH8O95206 1070 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 XPAP23025 273 aaPredicted RBP6.67□□□□□ -1.34
LINC00254-201ENST00000563416 MAGEA10P43363 369 aaPredicted RBP6.67□□□□□ -1.34
LINC00254-201ENST00000563416 NFKB2Q00653 900 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 FAPQ12884 760 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 HS1BP3Q53T59 392 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
LINC00254-201ENST00000563416 STRA8Q7Z7C7 330 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms