RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 AADACL2Q6P093 401 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 SYCE1Q8N0S2 351 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 ELMO3Q96BJ8 720 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 TRIM51Q9BSJ1 452 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 TRIM31Q9BZY9 425 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 RAVER2Q9HCJ3 691 aaKnown RBP10.89□□□□□ -0.67
LRRC28-216ENST00000559819 GOLGA8IPA6NC78 632 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 GOLGA8JA6NMD2 632 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 ALAS1P13196 640 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 HMGB2P26583 209 aaKnown RBP10.89□□□□□ -0.67
LRRC28-216ENST00000559819 HSD17B4P51659 736 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 SKOR1P84550 965 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 NBPF9Q3BBW0 867 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 C1orf220Q5T0J3 134 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 BCAS4Q8TDM0 211 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 RIT2Q99578 217 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 CENPHQ9H3R5 247 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 AGO4Q9HCK5 861 aaKnown RBP10.89□□□□□ -0.67
LRRC28-216ENST00000559819 KCND2Q9NZV8 630 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
LRRC28-216ENST00000559819 ICAM1P05362 532 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 KRT13P13646 458 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 EIF2AK2P19525 551 aaKnown RBP10.88□□□□□ -0.67
LRRC28-216ENST00000559819 MUTP22033 750 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 USP8P40818 1118 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 RARRES1P49788 294 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 NPEPPSP55786 919 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
LRRC28-216ENST00000559819 TKFCQ3LXA3 575 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 CALR3Q96L12 384 aaKnown RBP10.88□□□□□ -0.67
LRRC28-216ENST00000559819 AGPAT1Q99943 283 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 ERVK-5Q9HDB9 667 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 ACP6Q9NPH0 428 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 TMOD4Q9NZQ9 345 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 BACH1O14867 736 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 ZEB2O60315 1214 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 VAMP7P51809 220 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 GUCY1A3Q02108 690 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 KIF22Q14807 665 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 PLA2G4FQ68DD2 849 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 SLC9A9Q8IVB4 645 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 CD302Q8IX05 232 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 TAAR1Q96RJ0 339 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 LRRC4CQ9HCJ2 640 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 HSPBP1Q9NZL4 362 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 ATP8B3O60423 1300 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 RPTORQ8N122 1335 aa10.88□□□□□ -0.67
LRRC28-216ENST00000559819 SLC16A4O15374 487 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
LRRC28-216ENST00000559819 PLA2G6O60733 806 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 P4HBP07237 508 aaKnown RBP10.87□□□□□ -0.67
LRRC28-216ENST00000559819 MYCLP12524 364 aaPredicted RBP10.87□□□□□ -0.67
LRRC28-216ENST00000559819 MARCKSL1P49006 195 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 CUL1Q13616 776 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 CPNE8Q86YQ8 564 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 RPUSD2Q8IZ73 545 aaKnown RBP10.87□□□□□ -0.67
LRRC28-216ENST00000559819 ALG3Q92685 438 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 ATP6V1G3Q96LB4 118 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 KIFC3Q9BVG8 833 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 RASSF4Q9H2L5 321 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 PGAP2Q9UHJ9 254 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 CCDC188H7C350 402 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 ATP9AO75110 1047 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 SGPL1O95470 568 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 ADRB2P07550 413 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 NR1D1P20393 614 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 PEX3P56589 373 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 KDM7AQ6ZMT4 941 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 SYTL5Q8TDW5 730 aaPredicted RBP10.87□□□□□ -0.67
LRRC28-216ENST00000559819 UBLCP1Q8WVY7 318 aaPredicted RBP10.87□□□□□ -0.67
LRRC28-216ENST00000559819 ACCSQ96QU6 501 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 LARSQ9P2J5 1176 aaKnown RBP10.87□□□□□ -0.67
LRRC28-216ENST00000559819 UBIAD1Q9Y5Z9 338 aa10.87□□□□□ -0.67
LRRC28-216ENST00000559819 MYH11P35749 1972 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 ANKRD62A6NC57 917 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 H0YGN5 161 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TBC1D12O60347 775 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 PLS3P13797 630 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 HPDP32754 393 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 POU5F1Q01860 360 aaKnown RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 MTMR1Q13613 665 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 EPC2Q52LR7 807 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 INTS8Q75QN2 995 aaKnown RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 HAUS6Q7Z4H7 955 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 HOMEZQ8IX15 550 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 NEK9Q8TD19 979 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 SAAL1Q96ER3 474 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 PCDHB18PQ96TA0 734 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TMBIM4Q9HC24 238 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 NFS1Q9Y697 457 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 ANKRD63C9JTQ0 380 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 FTLP02792 175 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 QARSP47897 775 aaKnown RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 SOX10P56693 466 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 CORO7P57737 925 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms