RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 PDLIM2Q96JY6 352 aa26.08■■□□□ 1.77
SIX4-203ENST00000556952 CEP63Q96MT8 703 aa26.08■■□□□ 1.77
SIX4-203ENST00000556952 CTAGE1Q96RT6 745 aa26.08■■□□□ 1.77
SIX4-203ENST00000556952 TSEN34Q9BSV6 310 aaKnown RBP26.08■■□□□ 1.77
SIX4-203ENST00000556952 ARHGAP28Q9P2N2 729 aa26.08■■□□□ 1.77
SIX4-203ENST00000556952 A0A1W2PQ45 241 aaPredicted RBP26.07■■□□□ 1.76
SIX4-203ENST00000556952 A0A1W2PQY0 241 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 CBFA2T2O43439 604 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 IGBP1P78318 339 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 KCNA1Q09470 495 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 NFIL3Q16649 462 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 LRRC55Q6ZSA7 311 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 HS2ST1Q7LGA3 356 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 MRFAP1L1Q96HT8 127 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 GBP3Q9H0R5 595 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 SUGCTQ9HAC7 445 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 CGNQ9P2M7 1197 aaKnown RBP26.07■■□□□ 1.76
SIX4-203ENST00000556952 MAGEC2Q9UBF1 373 aaPredicted RBP26.07■■□□□ 1.76
SIX4-203ENST00000556952 NRCAMQ92823 1304 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 MOXD2PA6NHM9 499 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 KCNJ18B7U540 433 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 KLRC1P26715 233 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 MLLT1Q03111 559 aaPredicted RBP26.07■■□□□ 1.76
SIX4-203ENST00000556952 KCNJ12Q14500 433 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 TCP11X2Q5H9J9 407 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 EFCAB12Q6NXP0 572 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 IRF2BP1Q8IU81 584 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 LRRC71Q8N4P6 559 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 PCSK9Q8NBP7 692 aaKnown RBP26.07■■□□□ 1.76
SIX4-203ENST00000556952 EXOC7Q9UPT5 735 aa26.07■■□□□ 1.76
SIX4-203ENST00000556952 ADGRA3Q8IWK6 1321 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 SCN10AQ9Y5Y9 1956 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 DENND3A2RUS2 1198 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 TGFB1I1O43294 461 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 ATN1P54259 1190 aaPredicted RBP26.06■■□□□ 1.76
SIX4-203ENST00000556952 SNRPFP62306 86 aaKnown RBP26.06■■□□□ 1.76
SIX4-203ENST00000556952 MKRN4PQ13434 485 aaPredicted RBP26.06■■□□□ 1.76
SIX4-203ENST00000556952 MTHFD1LQ6UB35 978 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 CXCL17Q6UXB2 119 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.06■■□□□ 1.76
SIX4-203ENST00000556952 MAP4K3Q8IVH8 894 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 SYCP3Q8IZU3 236 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 LINC01465Q8N7H1 131 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 PRPF31Q8WWY3 499 aaKnown RBP26.06■■□□□ 1.76
SIX4-203ENST00000556952 PPP1R9BQ96SB3 815 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 MTG1Q9BT17 334 aaPredicted RBP26.06■■□□□ 1.76
SIX4-203ENST00000556952 KIFC3Q9BVG8 833 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 IFNKQ9P0W0 207 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 LIMA1Q9UHB6 759 aaKnown RBP26.06■■□□□ 1.76
SIX4-203ENST00000556952 TBX20Q9UMR3 447 aa26.06■■□□□ 1.76
SIX4-203ENST00000556952 ASAP2O43150 1006 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 TPM3P06753 285 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 SMIM10L2AP0DMW4 78 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 SMIM10L2BP0DMW5 78 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 RPL13P26373 211 aaKnown RBP26.05■■□□□ 1.76
SIX4-203ENST00000556952 TMOD1P28289 359 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 CDC25BP30305 580 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 UBASH3AP57075 661 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 DRP2Q13474 957 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 CAPSQ13938 189 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 DEPTORQ8TB45 409 aa26.05■■□□□ 1.76
SIX4-203ENST00000556952 SUCLA2Q9P2R7 463 aaPredicted RBP26.05■■□□□ 1.76
SIX4-203ENST00000556952 LRRIQ4A6NIV6 560 aa26.04■■□□□ 1.76
SIX4-203ENST00000556952 GNA14O95837 355 aa26.04■■□□□ 1.76
SIX4-203ENST00000556952 LRRC26Q2I0M4 334 aa26.04■■□□□ 1.76
SIX4-203ENST00000556952 KSR1Q8IVT5 923 aa26.04■■□□□ 1.76
SIX4-203ENST00000556952 METTL13Q8N6R0 699 aa26.04■■□□□ 1.76
SIX4-203ENST00000556952 CNOT6LQ96LI5 555 aaKnown RBP26.04■■□□□ 1.76
SIX4-203ENST00000556952 PHLPP2Q6ZVD8 1323 aa26.04■■□□□ 1.76
SIX4-203ENST00000556952 LRRC10BA6NIK2 292 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 CETN3O15182 167 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 NR2F2P24468 414 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 LAMTOR4Q0VGL1 99 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 TFDP1Q14186 410 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 MARCH8Q5T0T0 291 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 APTXQ7Z2E3 356 aaKnown RBP26.03■■□□□ 1.76
SIX4-203ENST00000556952 FILIP1Q7Z7B0 1213 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 TMEM174Q8WUU8 243 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 LMBR1Q8WVP7 490 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 XPO4Q9C0E2 1151 aaKnown RBP26.03■■□□□ 1.76
SIX4-203ENST00000556952 AGPAT3Q9NRZ7 376 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 NR3C1P04150 777 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 CLCN3P51790 818 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 ADAM9Q13443 819 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 MYBPC2Q14324 1141 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 KRT31Q15323 416 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 CDCA2Q69YH5 1023 aaPredicted RBP26.03■■□□□ 1.76
SIX4-203ENST00000556952 C2orf40Q9H1Z8 148 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 TMEM134Q9H6X4 195 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 STARD7Q9NQZ5 370 aa26.03■■□□□ 1.76
SIX4-203ENST00000556952 A0A1B0GTH6 734 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 EFNA5P52803 228 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 FILIP1LQ4L180 1135 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 SLC39A5Q6ZMH5 540 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 C12orf56Q8IXR9 622 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 GLT1D1Q96MS3 346 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 HTATIP2Q9BUP3 242 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 SETD4Q9NVD3 440 aa26.02■■□□□ 1.76
SIX4-203ENST00000556952 MBLAC1A4D2B0 266 aaPredicted RBP26.01■■□□□ 1.75
SIX4-203ENST00000556952 POU5F1BQ06416 359 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms