RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 CNNM4Q6P4Q7 775 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 FAM178BQ8IXR5 827 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 PDILTQ8N807 584 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 C4orf32Q8N8J7 132 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 BANK1Q8NDB2 785 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 LMBR1Q8WVP7 490 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 PSPC1Q8WXF1 523 aaKnown RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 KIFAP3Q92845 792 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 HLA-CQ95604 372 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 DYDC2Q96IM9 177 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 TIGD1Q96MW7 591 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 TGS1Q96RS0 853 aaKnown RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 MTRQ99707 1265 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 INO80BQ9C086 356 aaPredicted RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 NUP62CLQ9H1M0 184 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 RNPEPQ9H4A4 650 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 GDPD2Q9HCC8 539 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 EXOC1Q9NV70 894 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 LARSQ9P2J5 1176 aaKnown RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 SEL1LQ9UBV2 794 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 MTUS1Q9ULD2 1270 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 ODF2LQ9ULJ1 636 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 COL4A3BPQ9Y5P4 624 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 MAFBQ9Y5Q3 323 aaPredicted RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 MYH15Q9Y2K3 1946 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 ZNF292O60281 2723 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 RIF1Q5UIP0 2472 aaKnown RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 IGKV6D-21A0A0A0MT36 114 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 A0A1B0GVL5 298 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 GSTTP1A0A1W2PQM5 241 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 FAM86C2PA6NEL3 165 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 RSPH10B2B2RC85 870 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 PI4K2BG5E9Z4 385 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 DHX15O43143 795 aaKnown RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 GTPBP6O43824 516 aaPredicted RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 GPR37L1O60883 481 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 SLITRK3O94933 977 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ZNF202O95125 648 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 CCNE2O96020 404 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 PLA2G4BP0C869 781 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 RSPH10BP0C881 870 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 GAP43P17677 238 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 KCNJ6P48051 423 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ASIC1P78348 528 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 SPIRE1Q08AE8 756 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 KARSQ15046 597 aaKnown RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 PCBP1Q15365 356 aaKnown RBP eCLIP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 TMEM132AQ24JP5 1023 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 CTC1Q2NKJ3 1217 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 LEXMQ3ZCV2 418 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 MTERF2Q49AM1 385 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 TMEM119Q4V9L6 283 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 EPC2Q52LR7 807 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 MARCH8Q5T0T0 291 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 CCDC183Q5T5S1 534 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 IER5Q5VY09 327 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 FAM117BQ6P1L5 589 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 SHC4Q6S5L8 630 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 SASS6Q6UVJ0 657 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 RUFY4Q6ZNE9 571 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 RPAINQ86UA6 219 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 GPBP1Q86WP2 473 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 CATSPER3Q86XQ3 398 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 CCDC60Q8IWA6 550 aaPredicted RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ZBTB8OSQ8IWT0 167 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ELOA2Q8IYF1 753 aaPredicted RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 NME8Q8N427 588 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 METTL13Q8N6R0 699 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 RAD54LQ92698 747 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 SMARCE1Q969G3 411 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 TOP1MTQ969P6 601 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ZBTB10Q96DT7 871 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 CLIC6Q96NY7 704 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 PCYT2Q99447 389 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 HSD17B14Q9BPX1 270 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 NIFKQ9BYG3 293 aaKnown RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 NAT10Q9H0A0 1025 aaKnown RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 C2orf40Q9H1Z8 148 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 BHMT2Q9H2M3 363 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ZHX3Q9H4I2 956 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 CYP26B1Q9NR63 512 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 SETD4Q9NVD3 440 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 RGL1Q9NZL6 768 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 TUBE1Q9UJT0 475 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 EXOC7Q9UPT5 735 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ARIH1Q9Y4X5 557 aaPredicted RBP5.29□□□□□ -1.56
SSBP3-213ENST00000530618 FRYLO94915 3013 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 GVINP1Q7Z2Y8 2422 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 C2orf16Q68DN1 1984 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 DMXL1Q9Y485 3027 aa5.29□□□□□ -1.56
SSBP3-213ENST00000530618 ARID2Q68CP9 1835 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 FAM237AA0A1B0GTK4 181 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 PVALEFA0A1B0GWK0 134 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 MBLAC1A4D2B0 266 aaPredicted RBP5.28□□□□□ -1.56
SSBP3-213ENST00000530618 GRXCR2A6NFK2 248 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 C5orf67F2Z3F1 127 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 H3BNC9 293 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 EML1O00423 815 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 ADAMTS3O15072 1205 aa5.28□□□□□ -1.56
SSBP3-213ENST00000530618 USO1O60763 962 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms