RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 AGAP1Q9UPQ3 857 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 ARL2BPQ9Y2Y0 163 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 CD2APQ9Y5K6 639 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 IGKV6D-41A0A0C4DH26 115 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 STAT3P40763 770 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 FMO5P49326 533 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 ALDH5A1P51649 535 aaPredicted RBP11.06□□□□□ -0.64
SPIDR-225ENST00000524141 LACTBP83111 547 aaPredicted RBP11.06□□□□□ -0.64
SPIDR-225ENST00000524141 SPIRE1Q08AE8 756 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 AP3B2Q13367 1082 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 CCDC137Q6PK04 289 aaKnown RBP11.06□□□□□ -0.64
SPIDR-225ENST00000524141 PRELID2Q8N945 189 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 TBC1D16Q8TBP0 767 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 ARHGEF26Q96DR7 871 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 SERPINB12Q96P63 405 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 RPS6KC1Q96S38 1066 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 ZSWIM1Q9BR11 485 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 ANO3Q9BYT9 981 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 THAP2Q9H0W7 228 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 APEX2Q9UBZ4 518 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 L3MBTL1Q9Y468 752 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 ALG6Q9Y672 507 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 LIN7AO14910 233 aaPredicted RBP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 LUC7L3O95232 432 aaKnown RBP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 FGFR4P22455 802 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 SKIV2L2P42285 1042 aaKnown RBP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 SLCO1A2P46721 670 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 RHBDL3P58872 404 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 KCNJ2P63252 427 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 ATP11AP98196 1134 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 CALCOCO2Q13137 446 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 KCTD19Q17RG1 926 aaPredicted RBP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 ETNPPLQ8TBG4 499 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 ART4Q93070 314 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 TRIM7Q9C029 511 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 RXFP1Q9HBX9 757 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 SEPT11Q9NVA2 429 aaKnown RBP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 TMOD4Q9NZQ9 345 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 CLIC2O15247 247 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 GJB6O95452 261 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 ALAS1P13196 640 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 TM4SF1P30408 202 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 KIF22Q14807 665 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 PPP2R5AQ15172 486 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 BZW1Q7L1Q6 419 aaKnown RBP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 EXOC3L1Q86VI1 746 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 USP40Q9NVE5 1235 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 FGFR1OP2Q9NVK5 253 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 THRAP3Q9Y2W1 955 aaKnown RBP11.05□□□□□ -0.64
SPIDR-225ENST00000524141 PCDHA3Q9Y5H8 950 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 TCP11X1B4DZS4 312 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 SPATA31C1P0DKV0 1188 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 PSMC6P62333 389 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 LMNB2Q03252 620 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 SPATA21Q7Z572 469 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 CCDC105Q8IYK2 499 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 FAM20AQ96MK3 541 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 CTTNBP2NLQ9P2B4 639 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 COG5Q9UP83 839 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 FRMD4BQ9Y2L6 1034 aa11.05□□□□□ -0.64
SPIDR-225ENST00000524141 GAKO14976 1311 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 UBE4BO95155 1302 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 TMEM120BA0PK00 339 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 MEIS1O00470 390 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 TGFB1I1O43294 461 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 BCRP11274 1271 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 AKR1B1P15121 316 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 MSH2P43246 934 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 EIF6P56537 245 aaKnown RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 GABPAQ06546 454 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 Q4G0T1 1027 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 NUGGCQ68CJ6 796 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 DPP8Q6V1X1 898 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 STXBP4Q6ZWJ1 553 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 HS2ST1Q7LGA3 356 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 LINC00116Q8NCU8 138 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 ARHGEF2Q92974 986 aaKnown RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 RAB3IPQ96QF0 476 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 GPR88Q9GZN0 384 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 INTS2Q9H0H0 1204 aaKnown RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 DBR1Q9UK59 544 aaKnown RBP11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L15C9J2P7 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L10C9JJH3 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L13C9JLJ4 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L11C9JVI0 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L18D6R9N7 530 aa11.04□□□□□ -0.64
SPIDR-225ENST00000524141 USP17L22D6RA61 530 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms