RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
CLIP1-204ENST00000501271 PPP3CAQ08209 521 aa10.69□□□□□ -0.7
CLIP1-204ENST00000501271 CUL1Q13616 776 aa10.69□□□□□ -0.7
CLIP1-204ENST00000501271 ARHGEF19Q8IW93 802 aa10.69□□□□□ -0.7
CLIP1-204ENST00000501271 C10orf67Q8IYJ2 551 aa10.69□□□□□ -0.7
CLIP1-204ENST00000501271 AGO4Q9HCK5 861 aaKnown RBP10.69□□□□□ -0.7
CLIP1-204ENST00000501271 PLAAQ9Y263 795 aa10.69□□□□□ -0.7
CLIP1-204ENST00000501271 ANKRD65E5RJM6 399 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 TTI1O43156 1089 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 ASNSP08243 561 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 KRT13P13646 458 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 TNFAIP3P21580 790 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 HSD17B3P37058 310 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 ATP1A2P50993 1020 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 PDCLQ13371 301 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 MYBPC2Q14324 1141 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 UAP1Q16222 522 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 UGCGQ16739 394 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 TBC1D10BQ4KMP7 808 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 C1orf220Q5T0J3 134 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 FKBP1CQ5VVH2 108 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 EIF1ADQ8N9N8 165 aaKnown RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 PLEKHO2Q8TD55 490 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 LARSQ9P2J5 1176 aaKnown RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 NR2E1Q9Y466 385 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 SAMM50Q9Y512 469 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 FGGP02679 453 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 RFX1P22670 979 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 FLT3P36888 993 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 GCLMP48507 274 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 VAMP7P51809 220 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 EPC2Q52LR7 807 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 NAA35Q5VZE5 725 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 INTS8Q75QN2 995 aaKnown RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 FAM83AQ86UY5 434 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 CPXCR1Q8N123 301 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 PSMD1Q99460 953 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 AGPAT1Q99943 283 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 SLITRK6Q9H5Y7 841 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 UBE2TQ9NPD8 197 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 DBR1Q9UK59 544 aaKnown RBP10.68□□□□□ -0.7
CLIP1-204ENST00000501271 UBIAD1Q9Y5Z9 338 aa10.68□□□□□ -0.7
CLIP1-204ENST00000501271 ANKRD62A6NC57 917 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 DAPK3O43293 454 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 CCDC172P0C7W6 258 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 ALAS1P13196 640 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 PLS3P13797 630 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 QARSP47897 775 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 CCT5P48643 541 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 POU5F1Q01860 360 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 MTMR1Q13613 665 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 NBPF9Q3BBW0 867 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 CEP85LQ5SZL2 805 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 PCNX4Q63HM2 1172 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 KDM7AQ6ZMT4 941 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 NIPA1Q7RTP0 329 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 TRMT1LQ7Z2T5 733 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 MAATS1Q7Z4T9 603 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 TTLL6Q8N841 843 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 BCAS4Q8TDM0 211 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 KAT5Q92993 513 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 RNPC3Q96LT9 517 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 ACCSQ96QU6 501 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 PDGFDQ9GZP0 370 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 GPRC5CQ9NQ84 441 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 TTC7AQ9ULT0 858 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 DAAM1Q9Y4D1 1078 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 PARP14Q460N5 1801 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 ASTN2O75129 1339 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 H0YGN5 161 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 BACH1O14867 736 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 MAPTP10636 758 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 EIF2AK2P19525 551 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 YWHABP31946 246 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 GHRHRQ02643 423 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 MAP3K10Q02779 954 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 TNIP1Q15025 636 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 FMNL3Q8IVF7 1028 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 C12orf56Q8IXR9 622 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 RTKN2Q8IZC4 609 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 PRPF38AQ8NAV1 312 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 MTMR14Q8NCE2 650 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 OR2W6PQ8NHA6 318 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 ALG3Q92685 438 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 ATP6V1G3Q96LB4 118 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 RAVER2Q9HCJ3 691 aaKnown RBP10.67□□□□□ -0.7
CLIP1-204ENST00000501271 NFS1Q9Y697 457 aa10.67□□□□□ -0.7
CLIP1-204ENST00000501271 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 WNT10BO00744 389 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 SLC16A4O15374 487 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 ADRB2P07550 413 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 NR1D1P20393 614 aa10.66□□□□□ -0.7
CLIP1-204ENST00000501271 COPB2P35606 906 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms