RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ST20-MTHFSA0A0A6YYL1 179 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 MATN2O00339 956 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 RFPL1O75677 317 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 PRPF6O94906 941 aaKnown RBP5.31□□□□□ -1.56
SMC4-225ENST00000497203 ABLIM3O94929 683 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 APOL3O95236 402 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 SCGB1D2O95969 90 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 MTHFD2P13995 350 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 VCAM1P19320 739 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 ENPP1P22413 925 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 MANFP55145 182 aaKnown RBP5.31□□□□□ -1.56
SMC4-225ENST00000497203 EFEMP1Q12805 493 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 MAP3K12Q12852 859 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 FSCN1Q16658 493 aaKnown RBP5.31□□□□□ -1.56
SMC4-225ENST00000497203 UNQ6494/PRO21346Q6UXR6 183 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 KANSL1Q7Z3B3 1105 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 RAVER1Q8IY67 606 aaKnown RBP5.31□□□□□ -1.56
SMC4-225ENST00000497203 RSAD2Q8WXG1 361 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 NEIL1Q96FI4 390 aaPredicted RBP5.31□□□□□ -1.56
SMC4-225ENST00000497203 C8orf48Q96LL4 319 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 LMF1Q96S06 567 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 ORAI2Q96SN7 254 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 SEC61A2Q9H9S3 476 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 TCF7L1Q9HCS4 588 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 ZNF180Q9UJW8 692 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 CNOT11Q9UKZ1 510 aaKnown RBP5.31□□□□□ -1.56
SMC4-225ENST00000497203 LUC7L2Q9Y383 392 aaKnown RBP5.31□□□□□ -1.56
SMC4-225ENST00000497203 NR2E1Q9Y466 385 aa5.31□□□□□ -1.56
SMC4-225ENST00000497203 KLHL33A6NCF5 533 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 ELL2O00472 640 aaPredicted RBP5.3□□□□□ -1.56
SMC4-225ENST00000497203 KIF3BO15066 747 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 ARHGAP6O43182 974 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 ZSCAN20P17040 1043 aaPredicted RBP5.3□□□□□ -1.56
SMC4-225ENST00000497203 GPR3P46089 330 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 MEOX1P50221 254 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 RAC3P60763 192 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 ADCY2Q08462 1091 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 NFYCQ13952 458 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 ICAM4Q14773 271 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 PDCD1Q15116 288 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 PCBP2Q15366 365 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMC4-225ENST00000497203 CLUL1Q15846 466 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 UGT8Q16880 541 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 ZNF568Q3ZCX4 644 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 KIAA1841Q6NSI8 718 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 USP30Q70CQ3 517 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 WDR75Q8IWA0 830 aaKnown RBP5.3□□□□□ -1.56
SMC4-225ENST00000497203 CFHR4Q92496 578 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 RPGRQ92834 1020 aaKnown RBP5.3□□□□□ -1.56
SMC4-225ENST00000497203 RAX2Q96IS3 184 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 LOXL4Q96JB6 756 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 DPYSL5Q9BPU6 564 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 OR10A2Q9H208 303 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 CCM2LQ9NUG4 571 aaPredicted RBP5.3□□□□□ -1.56
SMC4-225ENST00000497203 KCMF1Q9P0J7 381 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 ANKRD6Q9Y2G4 727 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 GIT1Q9Y2X7 761 aa5.3□□□□□ -1.56
SMC4-225ENST00000497203 GOLGA6CA6NDK9 693 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 GOLGA6BA6NDN3 693 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 FZD9O00144 591 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 XPOTO43592 962 aaKnown RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 GOLGA6DP0CG33 693 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 BCAR1P56945 870 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 MRPS9P82933 396 aaKnown RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 HGFACQ04756 655 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 ADAM15Q13444 863 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 DGKDQ16760 1214 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMC4-225ENST00000497203 ZBTB41Q5SVQ8 909 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 EFCAB2Q5VUJ9 269 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 NXNQ6DKJ4 435 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 CXorf57Q6NSI4 855 aaKnown RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 CIR1Q86X95 450 aaPredicted RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 CMIPQ8IY22 773 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 TCEAL8Q8IYN2 117 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 MYO1HQ8N1T3 1032 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 CPA6Q8N4T0 437 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 OR14K1Q8NGZ2 314 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 JPH3Q8WXH2 748 aaPredicted RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 TSR2Q969E8 191 aaKnown RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 SAMD11Q96NU1 681 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 ANO3Q9BYT9 981 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 TMPRSS5Q9H3S3 457 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 MTG2Q9H4K7 406 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 DNAJC28Q9NX36 388 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 SMPD4Q9NXE4 827 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 GOLGA6AQ9NYA3 693 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 SAE1Q9UBE0 346 aaPredicted RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 IP6K2Q9UHH9 426 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 ST6GALNAC2Q9UJ37 374 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 PNMA8BQ9ULN7 279 aaPredicted RBP5.29□□□□□ -1.56
SMC4-225ENST00000497203 OAZ3Q9UMX2 235 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 PPP2R3BQ9Y5P8 575 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 NUMBLQ9Y6R0 609 aa5.29□□□□□ -1.56
SMC4-225ENST00000497203 H2AFYO75367 372 aaKnown RBP5.28□□□□□ -1.56
SMC4-225ENST00000497203 SLC5A3P53794 718 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 ACAP2Q15057 778 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 FAM102BQ5T8I3 360 aa5.28□□□□□ -1.56
SMC4-225ENST00000497203 TCTN3Q6NUS6 607 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms