RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 GOLGA8AA7E2F4 631 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 K7ESF4 209 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 MUSKO15146 869 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 MFAP3LO75121 409 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 KATNA1O75449 491 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 RAD17O75943 681 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 PCDH8O95206 1070 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 ADRB1P08588 477 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 VSIG10L2P0DP72 767 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 GYPEP15421 78 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 GNAT2P19087 354 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 STAT5BP51692 787 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 MANFP55145 182 aaKnown RBP3.18□□□□□ -1.9
LMNB1-207ENST00000494185 NPEPPSP55786 919 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 SCAND1P57086 179 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 BPIFB4P59827 614 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 MXRA7P84157 204 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 PPARAQ07869 468 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 ITKQ08881 620 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 MTMR1Q13613 665 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 PRKD1Q15139 912 aaPredicted RBP3.18□□□□□ -1.9
LMNB1-207ENST00000494185 FSCN1Q16658 493 aaKnown RBP3.18□□□□□ -1.9
LMNB1-207ENST00000494185 UGT8Q16880 541 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 ANO4Q32M45 955 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 ZBTB41Q5SVQ8 909 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 CCDC62Q6P9F0 684 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 UNQ6494/PRO21346Q6UXR6 183 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 USP51Q70EK9 711 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 PRRT2Q7Z6L0 340 aaPredicted RBP3.18□□□□□ -1.9
LMNB1-207ENST00000494185 RPUSD2Q8IZ73 545 aaKnown RBP3.18□□□□□ -1.9
LMNB1-207ENST00000494185 PLA2G15Q8NCC3 412 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 AUTS2Q8WXX7 1259 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 DVL3Q92997 716 aaPredicted RBP3.18□□□□□ -1.9
LMNB1-207ENST00000494185 CEP89Q96ST8 783 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 TCF25Q9BQ70 676 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 MENTQ9BUN1 341 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 ANO3Q9BYT9 981 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 VTA1Q9NP79 307 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 TYW1Q9NV66 732 aaKnown RBP3.18□□□□□ -1.9
LMNB1-207ENST00000494185 C14orf119Q9NWQ9 140 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 HDAC5Q9UQL6 1122 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 PPP2R3BQ9Y5P8 575 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 SLC30A1Q9Y6M5 507 aa3.18□□□□□ -1.9
LMNB1-207ENST00000494185 MARCH6O60337 910 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CNOT4O95628 575 aaKnown RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 GASTP01350 101 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 PFKMP08237 780 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CLEC2LP0C7M8 214 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 ZNF888P0CJ79 500 aaPredicted RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 ENPP1P22413 925 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 MAGEA10P43363 369 aaPredicted RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 SLC16A1P53985 500 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 ERVK-21P61565 698 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 MRPS9P82933 396 aaKnown RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 DUSP2Q05923 314 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CRHR2Q13324 411 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 KLF1Q13351 362 aaPredicted RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 ADAM15Q13444 863 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 PDCD1Q15116 288 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CT83Q5H943 113 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CCDC181Q5TID7 509 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 SYDE2Q5VT97 1194 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 DBX2Q6ZNG2 339 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 TAX1BP1Q86VP1 789 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 GSPT2Q8IYD1 628 aaKnown RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 THEMISQ8N1K5 641 aaPredicted RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 OR14K1Q8NGZ2 314 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 LMBR1Q8WVP7 490 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CDC5LQ99459 802 aaKnown RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CHMP4AQ9BY43 222 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 TRIM8Q9BZR9 551 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 KIAA1683Q9H0B3 1180 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 NCDNQ9UBB6 729 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 DNAI1Q9UI46 699 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 MAGEL2Q9UJ55 1249 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 TRHDEQ9UKU6 1024 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 USP18Q9UMW8 372 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 ZFR2Q9UPR6 939 aaKnown RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 CTDP1Q9Y5B0 961 aaPredicted RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 RBM8AQ9Y5S9 174 aaKnown RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 ARID1BQ8NFD5 2236 aaPredicted RBP3.17□□□□□ -1.9
LMNB1-207ENST00000494185 WASHC2CQ9Y4E1 1318 aa3.17□□□□□ -1.9
LMNB1-207ENST00000494185 FAM171A2A8MVW0 826 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 GOLGA6L6A8MZA4 724 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 PRRG2O14669 202 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 TEX33O43247 280 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 PRAMEF4O60810 478 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 ZNF623O75123 536 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 TOX4O94842 621 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 LTA4HP09960 611 aaKnown RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 MGAT1P26572 445 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 KIR2DL3P43628 341 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 LGALS4P56470 323 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 ANTXR2P58335 489 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 EXOSC10Q01780 885 aaKnown RBP3.16□□□□□ -1.9
LMNB1-207ENST00000494185 PTH1RQ03431 593 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 RIN1Q13671 783 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 GRM7Q14831 915 aa3.16□□□□□ -1.9
LMNB1-207ENST00000494185 BRDTQ58F21 947 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms