RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 PPIP5K2O43314 1243 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 C21orf2O43822 256 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 MGRN1O60291 552 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 GH1P01241 217 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 COMTP21964 271 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 YY1P25490 414 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 PSMC2P35998 433 aaKnown RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 RANBP1P43487 201 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 NCALDP61601 193 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 EPM2AIP1Q7L775 607 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 RPUSD2Q8IZ73 545 aaKnown RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 SLC30A5Q8TAD4 765 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 REEP2Q9BRK0 252 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 DHX36Q9H2U1 1008 aaKnown RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 EXOC1LA0A1B0GW35 172 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 CFAP69A5D8W1 941 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 SNX3O60493 162 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 UFL1O94874 794 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 CFBP00751 764 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 GHRP10912 638 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 TAL1P17542 331 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 RASA1P20936 1047 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 KRT17Q04695 432 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 RCN2Q14257 317 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 ASTE1Q2TB18 679 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 MFSD14BQ5SR56 506 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 UBAP2Q5T6F2 1119 aaKnown RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 GBP7Q8N8V2 638 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 WDR66Q8TBY9 1149 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 TEKT4Q8WW24 435 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 BCAS3Q9H6U6 928 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 ZFATQ9P243 1243 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 ZNF219Q9P2Y4 722 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 LOC102724428A0A0B4J2F2 783 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 SOX5P35711 763 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 SCNN1DP51172 638 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 SIK1P57059 783 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 FYB2Q5VWT5 728 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 SYN2Q92777 582 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 DYDC2Q96IM9 177 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 KLF6Q99612 283 aaPredicted RBP10.55□□□□□ -0.72
ERCC3-208ENST00000491292 MXD3Q9BW11 206 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 ANKRD2Q9GZV1 360 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 ACP6Q9NPH0 428 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 AIPL1Q9NZN9 384 aa10.55□□□□□ -0.72
ERCC3-208ENST00000491292 FAM187AA6NFU0 413 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 OVGP1Q12889 678 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 EPC2Q52LR7 807 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 CFAP61Q8NHU2 1237 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
ERCC3-208ENST00000491292 SLC20A1Q8WUM9 679 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 CDC42EP4Q9H3Q1 356 aaKnown RBP10.54□□□□□ -0.72
ERCC3-208ENST00000491292 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
ERCC3-208ENST00000491292 H0YGN5 161 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 PODXLO00592 558 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 PIAS1O75925 651 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 CBX6O95503 412 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 CYP11B2P19099 503 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 RFC4P35249 363 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 CETN2P41208 172 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 SLC8A3P57103 927 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 STRN3Q13033 797 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 ITIH4Q14624 930 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 STXBP4Q6ZWJ1 553 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 IRF2BP2Q7Z5L9 587 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 RNF217Q8TC41 542 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 FAXDC2Q96IV6 333 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 BSDC1Q9NW68 430 aaPredicted RBP10.54□□□□□ -0.72
ERCC3-208ENST00000491292 SRP68Q9UHB9 627 aaKnown RBP10.54□□□□□ -0.72
ERCC3-208ENST00000491292 NFS1Q9Y697 457 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 KDM3BQ7LBC6 1761 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 ASAP2O43150 1006 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 MED24O75448 989 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 SLURP2P0DP57 97 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 CHRNA3P32297 505 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 ALG3Q92685 438 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 GGA2Q9UJY4 613 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 ZNF148Q9UQR1 794 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 IKBKGQ9Y6K9 419 aa10.54□□□□□ -0.72
ERCC3-208ENST00000491292 ATXN2Q99700 1313 aaKnown RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 FER1L4A9Z1Z3 1794 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 MAPK13O15264 365 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 LCA5LO95447 670 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 UBTFL6P0CB48 400 aaPredicted RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 CPA2P48052 419 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 CNGA2Q16280 664 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 MDH1BQ5I0G3 518 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 CCDC174Q6PII3 467 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ZNF572Q7Z3I7 529 aaPredicted RBP10.53□□□□□ -0.72
ERCC3-208ENST00000491292 ADGRF4Q8IZF3 695 aa10.53□□□□□ -0.72
ERCC3-208ENST00000491292 SAYSD1Q9NPB0 183 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms