RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 C1orf220Q5T0J3 134 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
PTCD2-204ENST00000486995 NIPA1Q7RTP0 329 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 AGPAT1Q99943 283 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 CBWD1Q9BRT8 395 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-204ENST00000486995 COG5Q9UP83 839 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 NR2E1Q9Y466 385 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 UBIAD1Q9Y5Z9 338 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 COL4A5P29400 1685 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 PSME4Q14997 1843 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 ANKRD62A6NC57 917 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 FGGP02679 453 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 ASNSP08243 561 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 PLS3P13797 630 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 HSD17B3P37058 310 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 VAMP7P51809 220 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 SPP2Q13103 211 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 UAP1Q16222 522 aaPredicted RBP13.36□□□□□ -0.27
PTCD2-204ENST00000486995 KDM7AQ6ZMT4 941 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 ARHGEF19Q8IW93 802 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 C12orf56Q8IXR9 622 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 ZSWIM2Q8NEG5 633 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 SLC20A1Q8WUM9 679 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 PSMD1Q99460 953 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 TSPYL1Q9H0U9 437 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 A6NNZ2 444 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 H0YGN5 161 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 ATP1A2P50993 1020 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 GHRHRQ02643 423 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 PDCLQ13371 301 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 ALCAMQ13740 583 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 TUBB8Q3ZCM7 444 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 MAATS1Q7Z4T9 603 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 PRPF38AQ8NAV1 312 aaKnown RBP13.35□□□□□ -0.27
PTCD2-204ENST00000486995 MTMR14Q8NCE2 650 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 CCDC26Q8TAB7 109 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 BCAS4Q8TDM0 211 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 ACCSQ96QU6 501 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 SH2D3AQ9BRG2 576 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 ZNF341Q9BYN7 854 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 SEPT11Q9NVA2 429 aaKnown RBP13.35□□□□□ -0.27
PTCD2-204ENST00000486995 NFS1Q9Y697 457 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 MYH11P35749 1972 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 TTI1O43156 1089 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 DAPK3O43293 454 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 LYPLA2O95372 231 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 FLT3P36888 993 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
PTCD2-204ENST00000486995 GCLMP48507 274 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 TNIP1Q15025 636 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 PCNX4Q63HM2 1172 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 LRIG3Q6UXM1 1119 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 PLEKHO2Q8TD55 490 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 ATP6V1G3Q96LB4 118 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 RNPC3Q96LT9 517 aaKnown RBP13.35□□□□□ -0.27
PTCD2-204ENST00000486995 CELF4Q9BZC1 486 aaKnown RBP13.35□□□□□ -0.27
PTCD2-204ENST00000486995 RABEP2Q9H5N1 569 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
PTCD2-204ENST00000486995 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
PTCD2-204ENST00000486995 TMEM150BA6NC51 233 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 ANKRD65E5RJM6 399 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 P4HA2O15460 535 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 CCT5P48643 541 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 GTF2BQ00403 316 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 CEP85LQ5SZL2 805 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 MCF2L2Q86YR7 1114 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 TTLL6Q8N841 843 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 SYTL5Q8TDW5 730 aaPredicted RBP13.34□□□□□ -0.27
PTCD2-204ENST00000486995 LRRC45Q96CN5 670 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 CARD9Q9H257 536 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 TMBIM4Q9HC24 238 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 HSPBP1Q9NZL4 362 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
PTCD2-204ENST00000486995 CORO7P57737 925 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 MTMR1Q13613 665 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 NBPF9Q3BBW0 867 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 HAUS6Q7Z4H7 955 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 CPXCR1Q8N123 301 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 ZBED3Q96IU2 234 aaPredicted RBP13.34□□□□□ -0.27
PTCD2-204ENST00000486995 RASSF4Q9H2L5 321 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 ST6GALNAC4Q9H4F1 302 aa13.34□□□□□ -0.27
PTCD2-204ENST00000486995 SCAF8Q9UPN6 1271 aaKnown RBP13.34□□□□□ -0.27
PTCD2-204ENST00000486995 HMGB1P1B2RPK0 211 aaPredicted RBP13.33□□□□□ -0.28
PTCD2-204ENST00000486995 ALAS1P13196 640 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 NR1D1P20393 614 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
PTCD2-204ENST00000486995 CETN1Q12798 172 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 UGCGQ16739 394 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 NAA35Q5VZE5 725 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 OR2W6PQ8NHA6 318 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 ALG3Q92685 438 aa13.33□□□□□ -0.28
PTCD2-204ENST00000486995 TAAR1Q96RJ0 339 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms