RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 USP39Q53GS9 565 aaKnown RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 SMYD4Q8IYR2 804 aaPredicted RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 CCHCR1Q8TD31 782 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 HSPBP1Q9NZL4 362 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 ZNF804BA4D1E1 1349 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 SLC27A2O14975 620 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 ARHGEF9O43307 516 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 WDR47O94967 919 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 BMP3P12645 472 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 SYDE2Q5VT97 1194 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 ICE2Q659A1 982 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 R3HCC1LQ7Z5L2 792 aaKnown RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 APPBP2Q92624 585 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 CLIC6Q96NY7 704 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 BTBD9Q96Q07 612 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 SLC39A10Q9ULF5 831 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 NDUFS2O75306 463 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 DNAJC3Q13217 504 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 NR5A1Q13285 461 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 HDDC2Q7Z4H3 204 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 BEST2Q8NFU1 509 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 C9orf84Q5VXU9 1444 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
TRIM27-205ENST00000481474 DYNLL2Q96FJ2 89 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 CIPCQ9C0C6 399 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
TRIM27-205ENST00000481474 A0A0G2JLW4 131 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 STXBP3O00186 592 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 KPNA2P52292 529 aaKnown RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 AP2B1P63010 937 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 GNGT1P63211 74 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 GUCY2DQ02846 1103 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 CUL4AQ13619 759 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 IYDQ6PHW0 289 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 HASPINQ8TF76 798 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 TMEM87BQ96K49 555 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 UPF3AQ9H1J1 476 aaKnown RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 CYP4F11Q9HBI6 524 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 GOLGA8QA0A0J9YX86 632 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 GOLGA8OA6NCC3 632 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 GOLGA8NF8WBI6 632 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 M0QYV0 167 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 MAN1A2O60476 641 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 FKBP9O95302 570 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 FKBP9P1Q75LS8 142 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 OR9Q1Q8NGQ5 310 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 MPP4Q96JB8 637 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 SPATA16Q9BXB7 569 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 ADNPQ9H2P0 1102 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 AKAP7Q9P0M2 348 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 HSPA8P11142 646 aaKnown RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 NR2F2P24468 414 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 CDC25AP30304 524 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 PCYT1AP49585 367 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 CNGA2Q16280 664 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 ARHGAP15Q53QZ3 475 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 LRRC8EQ6NSJ5 796 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 RHBGQ9H310 441 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 A8MXQ7 604 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 CLDN3O15551 220 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 KRT8P05787 483 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 CSNK2BP67870 215 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 SPP2Q13103 211 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 LINS1Q8NG48 757 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 PRG3Q9Y2Y8 225 aaPredicted RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 TTI1O43156 1089 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 BRAFP15056 766 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 MAPRE1Q15691 268 aaKnown RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 UBE4BO95155 1302 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 MARSP56192 900 aaKnown RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 E2F4Q16254 413 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 COG1Q8WTW3 980 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 GFM2Q969S9 779 aaKnown RBP12.29□□□□□ -0.44
TRIM27-205ENST00000481474 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 USP28Q96RU2 1077 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 TUBGCP2Q9BSJ2 902 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 SCINQ9Y6U3 715 aa12.29□□□□□ -0.44
TRIM27-205ENST00000481474 MICAL3Q7RTP6 2002 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 GNA14O95837 355 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 CA4P22748 312 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 TMPRSS15P98073 1019 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 KLHL29Q96CT2 875 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 LRRC37BQ96QE4 947 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 MAD2L2Q9UI95 211 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 SLC9A8Q9Y2E8 581 aa12.28□□□□□ -0.44
TRIM27-205ENST00000481474 PASKQ96RG2 1323 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms