RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 GOLGA6L10A0A0M3HER8 536 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 ANKRD62A6NC57 917 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 RAD17O75943 681 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 HSPA6P17066 643 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 ITGB5P18084 799 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 TNFAIP3P21580 790 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 HNRNPH1P31943 449 aaKnown RBP9.18□□□□□ -0.94
USP30-206ENST00000479219 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
USP30-206ENST00000479219 ENPEPQ07075 957 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 MAPK7Q13164 816 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 MTMR1Q13613 665 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 MTMR3Q13615 1198 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 LRIG3Q6UXM1 1119 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 NT5DC3Q86UY8 548 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 RIN2Q8WYP3 895 aaPredicted RBP9.18□□□□□ -0.94
USP30-206ENST00000479219 SYT11Q9BT88 431 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 MAF1Q9H063 256 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 CARD9Q9H257 536 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 CXorf56Q9H5V9 222 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 AGO4Q9HCK5 861 aaKnown RBP9.18□□□□□ -0.94
USP30-206ENST00000479219 SMARCAL1Q9NZC9 954 aa9.18□□□□□ -0.94
USP30-206ENST00000479219 GOLGA6L10A6NI86 522 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 MIF4GDA9UHW6 222 aaKnown RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 DKC1O60832 514 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP30-206ENST00000479219 TAL1P17542 331 aaPredicted RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 HSPA9P38646 679 aaKnown RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 RARRES1P49788 294 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 GALCP54803 685 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 KRT76Q01546 638 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 TKFCQ3LXA3 575 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 SPATS2Q86XZ4 545 aaKnown RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 C4orf19Q8IY42 314 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 XXYLT1Q8NBI6 393 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 BANK1Q8NDB2 785 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 BCAS4Q8TDM0 211 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 MORC4Q8TE76 937 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 IFT81Q8WYA0 676 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 HOOK2Q96ED9 719 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 ZBED3Q96IU2 234 aaPredicted RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 ZNF341Q9BYN7 854 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 TMEM39BQ9GZU3 492 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 ANKEF1Q9NU02 776 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 NFU1Q9UMS0 254 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 NOC2LQ9Y3T9 749 aaKnown RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 ZNF536O15090 1300 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 KRIT1O00522 736 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 CARSP49589 748 aaKnown RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 VAMP7P51809 220 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 GNGT1P63211 74 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 UBXN2AP68543 259 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 SKOR1P84550 965 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 GTF2BQ00403 316 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 RASA3Q14644 834 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 SPDYCQ5MJ68 293 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 EMC10Q5UCC4 262 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 C11orf63Q6NUN7 778 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 B4GALNT4Q76KP1 1039 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 IQCKQ8N0W5 287 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 METTL13Q8N6R0 699 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 FAM81BQ96LP2 452 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 TACO1Q9BSH4 297 aaKnown RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 C17orf75Q9HAS0 396 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 WRAP73Q9P2S5 460 aaPredicted RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 PACSIN2Q9UNF0 486 aaPredicted RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 CTDP1Q9Y5B0 961 aaPredicted RBP9.17□□□□□ -0.94
USP30-206ENST00000479219 ZHX2Q9Y6X8 837 aa9.17□□□□□ -0.94
USP30-206ENST00000479219 PARP14Q460N5 1801 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 HMGB1P1B2RPK0 211 aaPredicted RBP9.16□□□□□ -0.94
USP30-206ENST00000479219 RAD51CO43502 376 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 KIAA0754O94854 1291 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 SCP2P22307 547 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 RXRBP28702 533 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 GBP1P32455 592 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 DNA2P51530 1060 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 SMTNP53814 917 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 PSMC5P62195 406 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 SKIDA1Q1XH10 827 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 CBWD6Q4V339 395 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 CBWD3Q5JTY5 395 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 CBWD5Q5RIA9 395 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 GLYCTKQ8IVS8 523 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 DAW1Q8N136 415 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 LNX1Q8TBB1 728 aaPredicted RBP9.16□□□□□ -0.94
USP30-206ENST00000479219 CASKIN2Q8WXE0 1202 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 CLEC4DQ8WXI8 215 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 RAB17Q9H0T7 212 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 SLC38A10Q9HBR0 1119 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 A1CFQ9NQ94 594 aaKnown RBP9.16□□□□□ -0.94
USP30-206ENST00000479219 FAM114A2Q9NRY5 505 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 PGAP2Q9UHJ9 254 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 AJAP1Q9UKB5 411 aaPredicted RBP9.16□□□□□ -0.94
USP30-206ENST00000479219 SAMM50Q9Y512 469 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 DOCK1Q14185 1865 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 GRIN2DO15399 1336 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 SYNGAP1Q96PV0 1343 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 FER1L6Q2WGJ9 1857 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 WDR64B1ANS9 1081 aa9.16□□□□□ -0.94
USP30-206ENST00000479219 BHMG1C9JSJ3 638 aaPredicted RBP9.16□□□□□ -0.94
USP30-206ENST00000479219 MAFGO15525 162 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms