RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 IQCA1LA6NCM1 817 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 GSTA4O15217 222 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 NDUFA10O95299 355 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 ZNF81P51508 661 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 NHLH1Q02575 133 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 DGKDQ16760 1214 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 GRASPQ7Z6J2 395 aaPredicted RBP4.21□□□□□ -1.74
XRN1-211ENST00000477237 CISD2Q8N5K1 135 aaKnown RBP4.21□□□□□ -1.74
XRN1-211ENST00000477237 SLC7A14Q8TBB6 771 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 DLG3Q92796 817 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 NDC1Q9BTX1 674 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 CPEB1Q9BZB8 566 aaKnown RBP4.21□□□□□ -1.74
XRN1-211ENST00000477237 TRPM5Q9NZQ8 1165 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 B3GALT1Q9Y5Z6 326 aa4.21□□□□□ -1.74
XRN1-211ENST00000477237 PIPSLA2A3N6 862 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 RNASET2O00584 256 aaKnown RBP4.2□□□□□ -1.74
XRN1-211ENST00000477237 RGS3P49796 1198 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 TMEM132BQ14DG7 1078 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 FAM47CQ5HY64 1035 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 CELF2-AS1Q8N7Q2 184 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 ZNF384Q8TF68 577 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 HNRNPLLQ8WVV9 542 aaKnown RBP4.2□□□□□ -1.74
XRN1-211ENST00000477237 WDR92Q96MX6 357 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 FOXB1Q99853 325 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 CPPED1Q9BRF8 314 aaPredicted RBP4.2□□□□□ -1.74
XRN1-211ENST00000477237 ZNF408Q9H9D4 720 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 TLK1Q9UKI8 766 aa4.2□□□□□ -1.74
XRN1-211ENST00000477237 ZBTB7CA1YPR0 619 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 HNRNPLP14866 589 aaKnown RBP eCLIP4.19□□□□□ -1.74
XRN1-211ENST00000477237 HOXB6P17509 224 aaKnown RBP4.19□□□□□ -1.74
XRN1-211ENST00000477237 KIR2DL3P43628 341 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 VPS72Q15906 364 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 BEAN1Q3B7T3 259 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 IQSEC1Q6DN90 963 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 GDF7Q7Z4P5 450 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 BRAPQ7Z569 592 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 OR52N2Q8NGI0 321 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 PTPRN2Q92932 1015 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 HAPLN2Q9GZV7 340 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 DNAI1Q9UI46 699 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 CHST2Q9Y4C5 530 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 PCDHA9Q9Y5H5 950 aa4.19□□□□□ -1.74
XRN1-211ENST00000477237 UNC119BA6NIH7 251 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 HOXA3O43365 443 aaPredicted RBP4.18□□□□□ -1.74
XRN1-211ENST00000477237 C1QL1O75973 258 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 ESRRBO95718 433 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 CFBP00751 764 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 C6orf222P0C671 652 aaPredicted RBP4.18□□□□□ -1.74
XRN1-211ENST00000477237 BMPR1AP36894 532 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 MPLP40238 635 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 METTL24Q5JXM2 366 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 CAGE1Q8TC20 777 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 DYDC2Q96IM9 177 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 TEX101Q9BY14 249 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 C14orf93Q9H972 538 aaKnown RBP4.18□□□□□ -1.74
XRN1-211ENST00000477237 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.18□□□□□ -1.74
XRN1-211ENST00000477237 SALL3Q9BXA9 1300 aa4.18□□□□□ -1.74
XRN1-211ENST00000477237 GAGE12BA1L429 117 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 GAGE12HA6NDE8 117 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 CGB1A6NKQ9 187 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 LEFTY2O00292 366 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 DAPK3O43293 454 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 ZFPL1O95159 310 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 ERCC5P28715 1186 aaPredicted RBP4.17□□□□□ -1.74
XRN1-211ENST00000477237 SLC6A3Q01959 620 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 GUCY1B3Q02153 619 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 SH2D3CQ8N5H7 860 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 ASB10Q8WXI3 467 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 ENKD1Q9H0I2 346 aa4.17□□□□□ -1.74
XRN1-211ENST00000477237 POLR3BQ9NW08 1133 aaPredicted RBP4.17□□□□□ -1.74
XRN1-211ENST00000477237 KIAA1522Q9P206 1035 aaPredicted RBP4.17□□□□□ -1.74
XRN1-211ENST00000477237 LRRC3CA6NJW4 275 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 CRTAMO95727 393 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 PRLP01236 227 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 TP53BP2Q13625 1128 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 GNL2Q13823 731 aaKnown RBP4.16□□□□□ -1.74
XRN1-211ENST00000477237 DDR2Q16832 855 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 ANKS3Q6ZW76 656 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 ARHGEF25Q86VW2 580 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 CPEB3Q8NE35 698 aaKnown RBP4.16□□□□□ -1.74
XRN1-211ENST00000477237 DCLRE1CQ96SD1 692 aaKnown RBP4.16□□□□□ -1.74
XRN1-211ENST00000477237 ADAM2Q99965 735 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 PDCD2LQ9BRP1 358 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 DUSP26Q9BV47 211 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 LSM14BQ9BX40 385 aaKnown RBP4.16□□□□□ -1.74
XRN1-211ENST00000477237 SEMA4GQ9NTN9 838 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 KCMF1Q9P0J7 381 aa4.16□□□□□ -1.74
XRN1-211ENST00000477237 MTSS1O43312 755 aa4.15□□□□□ -1.75
XRN1-211ENST00000477237 DNAJC6O75061 913 aa4.15□□□□□ -1.75
XRN1-211ENST00000477237 ROM1Q03395 351 aa4.15□□□□□ -1.75
XRN1-211ENST00000477237 MPP3Q13368 585 aa4.15□□□□□ -1.75
XRN1-211ENST00000477237 ABHD17BQ5VST6 288 aa4.15□□□□□ -1.75
XRN1-211ENST00000477237 FAM83AQ86UY5 434 aa4.15□□□□□ -1.75
XRN1-211ENST00000477237 LRRC47Q8N1G4 583 aaKnown RBP4.15□□□□□ -1.75
XRN1-211ENST00000477237 GLB1L3Q8NCI6 653 aaPredicted RBP4.15□□□□□ -1.75
XRN1-211ENST00000477237 KIAA1586Q9HCI6 787 aa4.15□□□□□ -1.75
XRN1-211ENST00000477237 MGST3O14880 152 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 KCNAB3O43448 404 aa4.14□□□□□ -1.75
XRN1-211ENST00000477237 EGR2P11161 476 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms