RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 RIT2Q99578 217 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
UFD1-206ENST00000466373 PLAAQ9Y263 795 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 ATP9AO75110 1047 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 P4HBP07237 508 aaKnown RBP11.29□□□□□ -0.6
UFD1-206ENST00000466373 HSD17B4P51659 736 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 PPP2R5AQ15172 486 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 DCAF12L1Q5VU92 463 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 SYCE1Q8N0S2 351 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 KCTD17Q8N5Z5 321 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 RFFLQ8WZ73 363 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 CCDC127Q96BQ5 260 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 HES6Q96HZ4 224 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 TAAR1Q96RJ0 339 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 ISCUQ9H1K1 167 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 COG5Q9UP83 839 aa11.29□□□□□ -0.6
UFD1-206ENST00000466373 COL2A1P02458 1487 aaPredicted RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 SHOX2O60902 331 aaPredicted RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 EGFRP00533 1210 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 YWHABP31946 246 aaKnown RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 VAMP7P51809 220 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 SOX10P56693 466 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 TNIP1Q15025 636 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 NFIL3Q16649 462 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 LMO3Q8TAP4 145 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 WHAMMQ8TF30 809 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 KCND2Q9NZV8 630 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 FEZ2Q9UHY8 353 aaPredicted RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 SORBS3O60504 671 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 TMEM253P0C7T8 217 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 HPDP32754 393 aaPredicted RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 HSD17B3P37058 310 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 QARSP47897 775 aaKnown RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 RPS6P62753 249 aaKnown RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 GUCY1A3Q02108 690 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 RASA3Q14644 834 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 FAM102BQ5T8I3 360 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 HAUS6Q7Z4H7 955 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 PRPF38AQ8NAV1 312 aaKnown RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 RNPC3Q96LT9 517 aaKnown RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 SYT11Q9BT88 431 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 STRA6Q9BX79 667 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 AGO4Q9HCK5 861 aaKnown RBP11.28□□□□□ -0.6
UFD1-206ENST00000466373 HSPBP1Q9NZL4 362 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 GRIN2DO15399 1336 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 UBE4BO95155 1302 aa11.28□□□□□ -0.6
UFD1-206ENST00000466373 CCDC169A6NNP5 214 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 CES2O00748 559 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 BACH1O14867 736 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.6
UFD1-206ENST00000466373 FTLP02792 175 aaPredicted RBP11.27□□□□□ -0.6
UFD1-206ENST00000466373 ANXA13P27216 316 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 SP4Q02446 784 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 MAP2K1Q02750 393 aaPredicted RBP11.27□□□□□ -0.6
UFD1-206ENST00000466373 LLGL1Q15334 1064 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 NSMFQ6X4W1 530 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.6
UFD1-206ENST00000466373 SAAL1Q96ER3 474 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 FAM84AQ96KN4 292 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 POP1Q99575 1024 aaKnown RBP11.27□□□□□ -0.6
UFD1-206ENST00000466373 AGPAT1Q99943 283 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 TCEAL9Q9UHQ7 104 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 INTUQ9ULD6 942 aa11.27□□□□□ -0.6
UFD1-206ENST00000466373 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.61
UFD1-206ENST00000466373 BCRP11274 1271 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 DPEP1P16444 411 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 CXCL9Q07325 125 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 INTS8Q75QN2 995 aaKnown RBP11.27□□□□□ -0.61
UFD1-206ENST00000466373 RTKN2Q8IZC4 609 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 UBLCP1Q8WVY7 318 aaPredicted RBP11.27□□□□□ -0.61
UFD1-206ENST00000466373 ALG3Q92685 438 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 BCCIPQ9P287 314 aaKnown RBP eCLIP11.27□□□□□ -0.61
UFD1-206ENST00000466373 CCDC172P0C7W6 258 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 PLS3P13797 630 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 MUTP22033 750 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.61
UFD1-206ENST00000466373 MARCKSL1P49006 195 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 UAP1Q16222 522 aaPredicted RBP11.27□□□□□ -0.61
UFD1-206ENST00000466373 XKR9Q5GH70 373 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 C1orf220Q5T0J3 134 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 CBWD2Q8IUF1 395 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 RPUSD2Q8IZ73 545 aaKnown RBP11.27□□□□□ -0.61
UFD1-206ENST00000466373 XXYLT1Q8NBI6 393 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 GLG1Q92896 1179 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 CALR3Q96L12 384 aaKnown RBP11.27□□□□□ -0.61
UFD1-206ENST00000466373 ACCSQ96QU6 501 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 ERVK-5Q9HDB9 667 aa11.27□□□□□ -0.61
UFD1-206ENST00000466373 DDX3YO15523 660 aaKnown RBP11.26□□□□□ -0.61
UFD1-206ENST00000466373 TBC1D12O60347 775 aa11.26□□□□□ -0.61
UFD1-206ENST00000466373 PPATQ06203 517 aa11.26□□□□□ -0.61
UFD1-206ENST00000466373 CETN1Q12798 172 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms