RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 CDCA2Q69YH5 1023 aaPredicted RBP13.08□□□□□ -0.32
RCL1-208ENST00000448872 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
RCL1-208ENST00000448872 TAS1R3Q7RTX0 852 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 ZNF410Q86VK4 478 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 FAM178BQ8IXR5 827 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 SPIRE2Q8WWL2 714 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 VWCEQ96DN2 955 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 NTPCRQ9BSD7 190 aaKnown RBP13.08□□□□□ -0.32
RCL1-208ENST00000448872 GCOM2Q9BZD3 368 aaPredicted RBP13.08□□□□□ -0.32
RCL1-208ENST00000448872 IKZF4Q9H2S9 585 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 C17orf75Q9HAS0 396 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 SLC39A2Q9NP94 309 aa13.08□□□□□ -0.32
RCL1-208ENST00000448872 LARSQ9P2J5 1176 aaKnown RBP13.08□□□□□ -0.32
RCL1-208ENST00000448872 DENND3A2RUS2 1198 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 BIN1O00499 593 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 B4GALT5O43286 388 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 RPLP2P05387 115 aaKnown RBP13.07□□□□□ -0.32
RCL1-208ENST00000448872 MAPTP10636 758 aaKnown RBP13.07□□□□□ -0.32
RCL1-208ENST00000448872 CSF2RAP15509 400 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 CD52P31358 61 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 PHKA2P46019 1235 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 SARSP49591 514 aaKnown RBP13.07□□□□□ -0.32
RCL1-208ENST00000448872 NCKAP1LP55160 1127 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 KCNA1Q09470 495 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 STK4Q13043 487 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 PPP2R5AQ15172 486 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 KLHL40Q2TBA0 621 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 ZNF720Q7Z2F6 126 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 FAM228AQ86W67 206 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 SMYD4Q8IYR2 804 aaPredicted RBP13.07□□□□□ -0.32
RCL1-208ENST00000448872 BADQ92934 168 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 SMARCE1Q969G3 411 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 CCDC34Q96HJ3 373 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 INO80BQ9C086 356 aaPredicted RBP13.07□□□□□ -0.32
RCL1-208ENST00000448872 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 MRPL44Q9H9J2 332 aaKnown RBP13.07□□□□□ -0.32
RCL1-208ENST00000448872 EXOC1Q9NV70 894 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 ARHGAP28Q9P2N2 729 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 PRKAG2Q9UGJ0 569 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 HOOK1Q9UJC3 728 aaKnown RBP13.07□□□□□ -0.32
RCL1-208ENST00000448872 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
RCL1-208ENST00000448872 SMC2O95347 1197 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 BMP6P22004 513 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 SMTNP53814 917 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 CDC42EP1Q00587 391 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 AMHR2Q16671 573 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 FAM26FQ5R3K3 315 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 HAUS6Q7Z4H7 955 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 KIAA0895Q8NCT3 520 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 NFKBIZQ9BYH8 718 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 OLFML3Q9NRN5 406 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 ST3GAL5Q9UNP4 418 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 GDAQ9Y2T3 454 aa13.06□□□□□ -0.32
RCL1-208ENST00000448872 TSPAN1O60635 241 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 PPP1R37O75864 691 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
RCL1-208ENST00000448872 RHOBTB3O94955 611 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 GCNT3O95395 438 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 ACRP10323 421 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 PTMSP20962 102 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 RGS19P49795 217 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 EPHB4P54760 987 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 POU5F1BQ06416 359 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
RCL1-208ENST00000448872 KCNB1Q14721 858 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 NT5DC1Q5TFE4 455 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 TSHZ1Q6ZSZ6 1077 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 ZBTB8OSQ8IWT0 167 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 STRA6Q9BX79 667 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 C2orf40Q9H1Z8 148 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 TMX1Q9H3N1 280 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 FZD8Q9H461 694 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 ERVK-5Q9HDB9 667 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 PADI3Q9ULW8 664 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 MAPK8IP1Q9UQF2 711 aa13.05□□□□□ -0.32
RCL1-208ENST00000448872 K7ERI5 159 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 PRKCBP05771 671 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 HOXD13P35453 343 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 GTF2BQ00403 316 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 PAK2Q13177 524 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 EPM2AIP1Q7L775 607 aaPredicted RBP13.04□□□□□ -0.32
RCL1-208ENST00000448872 CATSPER4Q7RTX7 472 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
RCL1-208ENST00000448872 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 DBF4BQ8NFT6 615 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 SCFD1Q8WVM8 642 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 CPB2Q96IY4 423 aa13.04□□□□□ -0.32
RCL1-208ENST00000448872 GSDMAQ96QA5 445 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms