RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 TUBGCP2Q9BSJ2 902 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 STRA6Q9BX79 667 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 BCAS3Q9H6U6 928 aa12.64□□□□□ -0.39
RFFL-205ENST00000415395 GSTTP1A0A1W2PQM5 241 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
RFFL-205ENST00000415395 TLR2O60603 784 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 TACC1O75410 805 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 PPP1R37O75864 691 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 OATP04181 439 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 MYBP10242 640 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 SCP2P22307 547 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 RPL13P26373 211 aaKnown RBP12.63□□□□□ -0.39
RFFL-205ENST00000415395 ABCD1P33897 745 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
RFFL-205ENST00000415395 CASP5P51878 434 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 TBC1D8BQ0IIM8 1120 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 DPP9Q86TI2 863 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 FBXO16Q8IX29 292 aaPredicted RBP12.63□□□□□ -0.39
RFFL-205ENST00000415395 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 SECISBP2LQ93073 1101 aaKnown RBP12.63□□□□□ -0.39
RFFL-205ENST00000415395 CEP170P1Q96L14 293 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 ALS2CR12Q96Q35 445 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 NIFKQ9BYG3 293 aaKnown RBP12.63□□□□□ -0.39
RFFL-205ENST00000415395 ZFYVE28Q9HCC9 887 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 CYP26B1Q9NR63 512 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
RFFL-205ENST00000415395 EMSYQ7Z589 1322 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 A6NNZ2 444 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 CETN3O15182 167 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 LGR5O75473 907 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 ARIH2O95376 493 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 TM4SF4P48230 202 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 SLC26A2P50443 739 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 VAV2P52735 878 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 SP4Q02446 784 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 MAN2A1Q16706 1144 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 LY6KQ17RY6 165 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 TUBB8Q3ZCM7 444 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 PLA2G4FQ68DD2 849 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 C17orf99Q6UX52 265 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 NELFCDQ8IXH7 590 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 DHX37Q8IY37 1157 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 TMEM174Q8WUU8 243 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 HVCN1Q96D96 273 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 CHP1Q99653 195 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 PDLIM7Q9NR12 457 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 NRBP2Q9NSY0 501 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 SEPT9Q9UHD8 586 aaPredicted RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 A0A0U1RQJ8 604 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 SFI1A8K8P3 1242 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 PRPF6O94906 941 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 TXNP10599 105 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 PRLRP16471 622 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 HOXD13P35453 343 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 TCF7P36402 384 aaPredicted RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 STAT5BP51692 787 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 NPEPPSP55786 919 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 SNRPFP62306 86 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 MYBPC2Q14324 1141 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 MORN1Q5T089 497 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 PLPPR4Q7Z2D5 763 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 EXOC8Q8IYI6 725 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 NOA1Q8NC60 698 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 KCNN1Q92952 543 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 EMID1Q96A84 441 aaPredicted RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 ERGIC2Q96RQ1 377 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 GPR20Q99678 358 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 AZI2Q9H6S1 392 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 TMEM206Q9H813 350 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 NHEJ1Q9H9Q4 299 aaPredicted RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 ATP6V0A4Q9HBG4 840 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 REXO2Q9Y3B8 237 aaKnown RBP12.62□□□□□ -0.39
RFFL-205ENST00000415395 JRKLQ9Y4A0 524 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 MGAMO43451 1857 aa12.62□□□□□ -0.39
RFFL-205ENST00000415395 H0YCG3 227 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
RFFL-205ENST00000415395 SLC16A3O15427 465 aaKnown RBP12.61□□□□□ -0.39
RFFL-205ENST00000415395 TOMM70O94826 608 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 HOXC6P09630 235 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 NMT1P30419 496 aaKnown RBP12.61□□□□□ -0.39
RFFL-205ENST00000415395 RFC5P40937 340 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 SMTNP53814 917 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 NCKAP1LP55160 1127 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 ADAM9Q13443 819 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 LAMC2Q13753 1193 aa12.61□□□□□ -0.39
RFFL-205ENST00000415395 TAPT1Q6NXT6 567 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms