RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 UGCGQ16739 394 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 BCAS4Q8TDM0 211 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 SLC20A1Q8WUM9 679 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 LMBR1Q8WVP7 490 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 ARHGEF26Q96DR7 871 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 AGO4Q9HCK5 861 aaKnown RBP21.21■□□□□ 0.99
RCCD1-201ENST00000394258 CHORDC1Q9UHD1 332 aaPredicted RBP21.21■□□□□ 0.99
RCCD1-201ENST00000394258 PPP1R9AQ9ULJ8 1098 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 PGRMC1O00264 195 aaKnown RBP21.21■□□□□ 0.99
RCCD1-201ENST00000394258 SLC16A4O15374 487 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 ATP9AO75110 1047 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 LMNB1P20700 586 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 MUTP22033 750 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 PRPF4BQ13523 1007 aaKnown RBP21.21■□□□□ 0.99
RCCD1-201ENST00000394258 PPP2R5AQ15172 486 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 FAM83AQ86UY5 434 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 MICALL1Q8N3F8 863 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 OR2W6PQ8NHA6 318 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 CTNNBL1Q8WYA6 563 aaPredicted RBP21.21■□□□□ 0.99
RCCD1-201ENST00000394258 STRA6Q9BX79 667 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 THAP2Q9H0W7 228 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 AMACRQ9UHK6 382 aa21.21■□□□□ 0.99
RCCD1-201ENST00000394258 RBBP6Q7Z6E9 1792 aaKnown RBP21.2■□□□□ 0.98
RCCD1-201ENST00000394258 KCNA3P22001 575 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 QARSP47897 775 aaKnown RBP21.2■□□□□ 0.98
RCCD1-201ENST00000394258 NPEPPSP55786 919 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 RPS6P62753 249 aaKnown RBP21.2■□□□□ 0.98
RCCD1-201ENST00000394258 PLA2G4FQ68DD2 849 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 ACTRT1Q8TDG2 376 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 SYTL5Q8TDW5 730 aaPredicted RBP21.2■□□□□ 0.98
RCCD1-201ENST00000394258 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.2■□□□□ 0.982e-7■■■□□ 16.5
RCCD1-201ENST00000394258 PGAP2Q9UHJ9 254 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 STXBP5LQ9Y2K9 1186 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 UBE4BO95155 1302 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 EIF3HO15372 352 aaKnown RBP eCLIP21.2■□□□□ 0.98
RCCD1-201ENST00000394258 PEX3P56589 373 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 NSMFQ6X4W1 530 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 ARHGEF19Q8IW93 802 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 CELF4Q9BZC1 486 aaKnown RBP21.2■□□□□ 0.98
RCCD1-201ENST00000394258 PLAAQ9Y263 795 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 NR2E1Q9Y466 385 aa21.2■□□□□ 0.98
RCCD1-201ENST00000394258 PHF20L1A8MW92 1017 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 YWHABP31946 246 aaKnown RBP21.19■□□□□ 0.98
RCCD1-201ENST00000394258 FLT3P36888 993 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 VAMP7P51809 220 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 FKBP1CQ5VVH2 108 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 ZNF746Q6NUN9 644 aaPredicted RBP21.19■□□□□ 0.98
RCCD1-201ENST00000394258 SLFN11Q7Z7L1 901 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 LMO3Q8TAP4 145 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 KAT5Q92993 513 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 ELMO3Q96BJ8 720 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 RNPC3Q96LT9 517 aaKnown RBP21.19■□□□□ 0.98
RCCD1-201ENST00000394258 TAF1DQ9H5J8 278 aaPredicted RBP21.19■□□□□ 0.98
RCCD1-201ENST00000394258 TESPA1A2RU30 521 aaPredicted RBP21.19■□□□□ 0.98
RCCD1-201ENST00000394258 ZEB2O60315 1214 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 HAUS6Q7Z4H7 955 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 MAATS1Q7Z4T9 603 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 KIFC3Q9BVG8 833 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 MYOZ2Q9NPC6 264 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 ACP6Q9NPH0 428 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 AMFRQ9UKV5 643 aa21.19■□□□□ 0.98
RCCD1-201ENST00000394258 BACH1O14867 736 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 ANXA13P27216 316 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 COPB2P35606 906 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 SYCE1Q8N0S2 351 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 CENPHQ9H3R5 247 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 SUCLA2Q9P2R7 463 aaPredicted RBP21.18■□□□□ 0.98
RCCD1-201ENST00000394258 A0A0A6YYK5 440 aaPredicted RBP21.18■□□□□ 0.98
RCCD1-201ENST00000394258 BCRP11274 1271 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 GUCY1A3Q02108 690 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 FAM102BQ5T8I3 360 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 MCF2L2Q86YR7 1114 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 AGBL3Q8NEM8 1001 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 PLEKHO2Q8TD55 490 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 PPM1EQ8WY54 764 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 RFFLQ8WZ73 363 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 ACCSQ96QU6 501 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 ISCUQ9H1K1 167 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 HSPBP1Q9NZL4 362 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 TCEAL9Q9UHQ7 104 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 INTUQ9ULD6 942 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 CTDP1Q9Y5B0 961 aaPredicted RBP21.18■□□□□ 0.98
RCCD1-201ENST00000394258 UBIAD1Q9Y5Z9 338 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 RPTORQ8N122 1335 aa21.18■□□□□ 0.98
RCCD1-201ENST00000394258 FGGP02679 453 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 PLS3P13797 630 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 LIG3P49916 1009 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 ZNF211Q13398 564 aaPredicted RBP21.17■□□□□ 0.98
RCCD1-201ENST00000394258 MTMR2Q13614 643 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 CEP85LQ5SZL2 805 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 SLC9A9Q8IVB4 645 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 TEX2Q8IWB9 1127 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 NEK9Q8TD19 979 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 CAMKK2Q96RR4 588 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 SYT11Q9BT88 431 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 COG5Q9UP83 839 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 ASTN2O75129 1339 aaPredicted RBP21.17■□□□□ 0.98
RCCD1-201ENST00000394258 CCDC169A6NNP5 214 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 CES2O00748 559 aa21.17■□□□□ 0.98
RCCD1-201ENST00000394258 SOX10P56693 466 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms