RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ERLIN2O94905 339 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 ITGB1P05556 798 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 SKIP12755 728 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 NAALADL2Q58DX5 795 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 KRT79Q5XKE5 535 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 HLA-CQ95604 372 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 ASB2Q96Q27 587 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 TRAIPQ9BWF2 469 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 FOXD4L1Q9NU39 408 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 FAM105AQ9NUU6 356 aa34.13■■■■□ 3.05
CMTM4-202ENST00000394106 DDX19AQ9NUU7 478 aaKnown RBP34.13■■■■□ 3.05
CMTM4-202ENST00000394106 PDCP20941 246 aa34.12■■■■□ 3.05
CMTM4-202ENST00000394106 CDC25AP30304 524 aa34.12■■■■□ 3.05
CMTM4-202ENST00000394106 TJAP1Q5JTD0 557 aa34.12■■■■□ 3.05
CMTM4-202ENST00000394106 LPPQ93052 612 aa34.12■■■■□ 3.05
CMTM4-202ENST00000394106 COL25A1Q9BXS0 654 aaPredicted RBP34.12■■■■□ 3.05
CMTM4-202ENST00000394106 CWH43Q9H720 699 aa34.12■■■■□ 3.05
CMTM4-202ENST00000394106 COG5Q9UP83 839 aa34.12■■■■□ 3.05
CMTM4-202ENST00000394106 ATG2AQ2TAZ0 1938 aa34.12■■■■□ 3.05
CMTM4-202ENST00000394106 K7ELQ4 463 aaPredicted RBP34.11■■■■□ 3.05
CMTM4-202ENST00000394106 RAB27AP51159 221 aa34.11■■■■□ 3.05
CMTM4-202ENST00000394106 TCEAL5Q5H9L2 206 aa34.11■■■■□ 3.05
CMTM4-202ENST00000394106 LRRC55Q6ZSA7 311 aa34.11■■■■□ 3.05
CMTM4-202ENST00000394106 BRAPQ7Z569 592 aa34.11■■■■□ 3.05
CMTM4-202ENST00000394106 LRRC43Q8N309 656 aa34.11■■■■□ 3.05
CMTM4-202ENST00000394106 COLGALT1Q8NBJ5 622 aa34.11■■■■□ 3.05
CMTM4-202ENST00000394106 BHMT2Q9H2M3 363 aa34.11■■■■□ 3.05
CMTM4-202ENST00000394106 NSUN3Q9H649 340 aaKnown RBP34.11■■■■□ 3.05
CMTM4-202ENST00000394106 LRRIQ4A6NIV6 560 aa34.1■■■■□ 3.05
CMTM4-202ENST00000394106 HOXA11P31270 313 aaPredicted RBP34.1■■■■□ 3.05
CMTM4-202ENST00000394106 POU5F1BQ06416 359 aa34.1■■■■□ 3.05
CMTM4-202ENST00000394106 PCDHB2Q9Y5E7 798 aa34.1■■■■□ 3.05
CMTM4-202ENST00000394106 VWA3AA6NCI4 1184 aa34.09■■■■□ 3.05
CMTM4-202ENST00000394106 TSPAN1O60635 241 aa34.09■■■■□ 3.05
CMTM4-202ENST00000394106 LAG3P18627 525 aa34.09■■■■□ 3.05
CMTM4-202ENST00000394106 CYP11B2P19099 503 aa34.09■■■■□ 3.05
CMTM4-202ENST00000394106 MBTD1Q05BQ5 628 aa34.09■■■■□ 3.05
CMTM4-202ENST00000394106 IFNLR1Q8IU57 520 aaPredicted RBP34.09■■■■□ 3.05
CMTM4-202ENST00000394106 THNSL1Q8IYQ7 743 aa34.09■■■■□ 3.05
CMTM4-202ENST00000394106 SPPL3Q8TCT6 385 aa34.09■■■■□ 3.05
CMTM4-202ENST00000394106 PLXNA4Q9HCM2 1894 aa34.08■■■■□ 3.05
CMTM4-202ENST00000394106 DNAJB1P25685 340 aa34.08■■■■□ 3.05
CMTM4-202ENST00000394106 NCBP1Q09161 790 aaKnown RBP34.08■■■■□ 3.05
CMTM4-202ENST00000394106 ZRSR1Q15695 479 aaKnown RBP34.08■■■■□ 3.05
CMTM4-202ENST00000394106 AAK1Q2M2I8 961 aa34.08■■■■□ 3.05
CMTM4-202ENST00000394106 INTS4Q96HW7 963 aaKnown RBP34.08■■■■□ 3.05
CMTM4-202ENST00000394106 CPB2Q96IY4 423 aa34.08■■■■□ 3.05
CMTM4-202ENST00000394106 MEIS3P2A8K0S8 358 aa34.07■■■■□ 3.04
CMTM4-202ENST00000394106 PCBP1Q15365 356 aaKnown RBP eCLIP34.07■■■■□ 3.04
CMTM4-202ENST00000394106 POF1BQ8WVV4 589 aa34.07■■■■□ 3.04
CMTM4-202ENST00000394106 MMTAG2Q9BU76 263 aaKnown RBP34.07■■■■□ 3.04
CMTM4-202ENST00000394106 NFKBIZQ9BYH8 718 aa34.07■■■■□ 3.04
CMTM4-202ENST00000394106 DNM3Q9UQ16 869 aa34.07■■■■□ 3.04
CMTM4-202ENST00000394106 E9PMD0 336 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 ZNF623O75123 536 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 SYT1P21579 422 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 CAMK1Q14012 370 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 CSPP1Q1MSJ5 1256 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 UBXN11Q5T124 520 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 ARL6IP4Q66PJ3 421 aaKnown RBP34.06■■■■□ 3.04
CMTM4-202ENST00000394106 SYMPKQ92797 1274 aaKnown RBP34.06■■■■□ 3.04
CMTM4-202ENST00000394106 PGBD4Q96DM1 585 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 MRPL9Q9BYD2 267 aaKnown RBP34.06■■■■□ 3.04
CMTM4-202ENST00000394106 INPP5FQ9Y2H2 1132 aa34.06■■■■□ 3.04
CMTM4-202ENST00000394106 FGF18O76093 207 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 AXLP30530 894 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 PBX3P40426 434 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 KCNQ1P51787 676 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 NOTUMQ6P988 496 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 GLB1LQ6UWU2 654 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 BSNDQ8WZ55 320 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 UBE2ZQ9H832 354 aaPredicted RBP34.05■■■■□ 3.04
CMTM4-202ENST00000394106 POLD4Q9HCU8 107 aa34.05■■■■□ 3.04
CMTM4-202ENST00000394106 EYA4O95677 639 aa34.04■■■■□ 3.04
CMTM4-202ENST00000394106 AMHR2Q16671 573 aa34.04■■■■□ 3.04
CMTM4-202ENST00000394106 KCNT2Q6UVM3 1135 aa34.04■■■■□ 3.04
CMTM4-202ENST00000394106 ZBTB8OSQ8IWT0 167 aa34.04■■■■□ 3.04
CMTM4-202ENST00000394106 ZNF558Q96NG5 402 aa34.04■■■■□ 3.04
CMTM4-202ENST00000394106 MYO7AQ13402 2215 aa34.04■■■■□ 3.04
CMTM4-202ENST00000394106 B4GALT5O43286 388 aa34.03■■■■□ 3.04
CMTM4-202ENST00000394106 EP400NLQ6ZTU2 488 aa34.03■■■■□ 3.04
CMTM4-202ENST00000394106 EIF2AQ9BY44 585 aaKnown RBP34.03■■■■□ 3.04
CMTM4-202ENST00000394106 ARF4P18085 180 aaPredicted RBP34.02■■■■□ 3.04
CMTM4-202ENST00000394106 IRS1P35568 1242 aa34.02■■■■□ 3.04
CMTM4-202ENST00000394106 SF3A1Q15459 793 aaKnown RBP34.02■■■■□ 3.04
CMTM4-202ENST00000394106 NOMO2Q5JPE7 1267 aa34.02■■■■□ 3.04
CMTM4-202ENST00000394106 AGMOQ6ZNB7 445 aa34.02■■■■□ 3.04
CMTM4-202ENST00000394106 KCNK18Q7Z418 384 aa34.02■■■■□ 3.04
CMTM4-202ENST00000394106 MRPL10Q7Z7H8 261 aaKnown RBP34.02■■■■□ 3.04
CMTM4-202ENST00000394106 SNX21Q969T3 373 aa34.02■■■■□ 3.04
CMTM4-202ENST00000394106 CCDC51Q96ER9 411 aa34.02■■■■□ 3.04
CMTM4-202ENST00000394106 PLIN2Q99541 437 aa34.02■■■■□ 3.04
CMTM4-202ENST00000394106 OFD1O75665 1012 aa34.01■■■■□ 3.03
CMTM4-202ENST00000394106 BMP15O95972 392 aa34.01■■■■□ 3.03
CMTM4-202ENST00000394106 KCNA5P22460 613 aa34.01■■■■□ 3.03
CMTM4-202ENST00000394106 UBE3AQ05086 875 aa34.01■■■■□ 3.03
CMTM4-202ENST00000394106 CDCA2Q69YH5 1023 aaPredicted RBP34.01■■■■□ 3.03
CMTM4-202ENST00000394106 DEPTORQ8TB45 409 aa34.01■■■■□ 3.03
CMTM4-202ENST00000394106 CDK5RAP3Q96JB5 506 aa34.01■■■■□ 3.03
CMTM4-202ENST00000394106 CSRNP2Q9H175 543 aa34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms