RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 FAM13AO94988 1023 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 EIF2AK2P19525 551 aaKnown RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 SLC12A3P55017 1021 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 SPIRE1Q08AE8 756 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 ZNF844Q08AG5 666 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 NBPF12Q5TAG4 269 aaPredicted RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 OSGEPQ9NPF4 335 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 CHORDC1Q9UHD1 332 aaPredicted RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 PNMA2Q9UL42 364 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 NFKBIEO00221 500 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 RPL13P26373 211 aaKnown RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 CASP4P49662 377 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 KCNA1Q09470 495 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 CEP55Q53EZ4 464 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 ZNF572Q7Z3I7 529 aaPredicted RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 FAM83AQ86UY5 434 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 GLG1Q92896 1179 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 SLC40A1Q9NP59 571 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 DDX20Q9UHI6 824 aaKnown RBP11.73□□□□□ -0.53
BRF1-204ENST00000392557 GGT7Q9UJ14 662 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 HACL1Q9UJ83 578 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 CD2APQ9Y5K6 639 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 CLTAP09496 248 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 TNFAIP3P21580 790 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 SP4Q02446 784 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 GIT2Q14161 759 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 QPCTQ16769 361 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 SYCP3Q8IZU3 236 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 TCP11Q8WWU5 503 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 SEC16BQ96JE7 1060 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 DEFB129Q9H1M3 183 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 TMOD4Q9NZQ9 345 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 FEM1BQ9UK73 627 aa11.73□□□□□ -0.53
BRF1-204ENST00000392557 GBP2P32456 591 aaPredicted RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 TRAF1Q13077 416 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 TNFAIP1Q13829 316 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 SNCBQ16143 134 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 DENND2CQ68D51 928 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 FAM160B2Q86V87 743 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 SYCE1Q8N0S2 351 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 ANKS4BQ8N8V4 417 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 PRPF38AQ8NAV1 312 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 RAPGEF5Q92565 580 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 CXorf56Q9H5V9 222 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 CTTNBP2NLQ9P2B4 639 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 CHUKO15111 745 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 RGS16O15492 202 aaPredicted RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 EZRP15311 586 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 TNFRSF8P28908 595 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 NMT1P30419 496 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 GALCP54803 685 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 FAM133BQ5BKY9 247 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 HIBCHQ6NVY1 386 aaPredicted RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 TPCN2Q8NHX9 752 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 CRYGNQ8WXF5 182 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 SYN2Q92777 582 aaPredicted RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 RANBP17Q9H2T7 1088 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 DAAM1Q9Y4D1 1078 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 BZW2Q9Y6E2 419 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 IPO5O00410 1097 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 TBX3O15119 743 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 PON1P27169 355 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 DR1Q01658 176 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 KNOP1Q1ED39 458 aaKnown RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 CCDC38Q502W7 563 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
BRF1-204ENST00000392557 MOXD1Q6UVY6 613 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 IL31RAQ8NI17 732 aa11.72□□□□□ -0.53
BRF1-204ENST00000392557 IGLV3-22A0A075B6J6 115 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 AKAP3O75969 853 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 NR3C1P04150 777 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.53
BRF1-204ENST00000392557 BIRC3Q13489 604 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 HYIQ5T013 277 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 SYT2Q8N9I0 419 aaPredicted RBP11.71□□□□□ -0.53
BRF1-204ENST00000392557 N4BP2L2Q92802 583 aaPredicted RBP11.71□□□□□ -0.53
BRF1-204ENST00000392557 WDR11Q9BZH6 1224 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 AIPL1Q9NZN9 384 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 SAMD15Q9P1V8 674 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 ODF2LQ9ULJ1 636 aa11.71□□□□□ -0.53
BRF1-204ENST00000392557 ADCY1Q08828 1119 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 UAP1Q16222 522 aaPredicted RBP11.71□□□□□ -0.54
BRF1-204ENST00000392557 OTUD6AQ7L8S5 288 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 OTOP1Q7RTM1 612 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 MBOAT7Q96N66 472 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 WRNIP1Q96S55 665 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 RAB17Q9H0T7 212 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 MLXIPLQ9NP71 852 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms