RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 SEC24CP53992 1094 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 ZNF844Q08AG5 666 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 FAM151AQ8WW52 585 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 LRRC45Q96CN5 670 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 AGPAT1Q99943 283 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 LRRC4CQ9HCJ2 640 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 ERVK-5Q9HDB9 667 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 KCNH7Q9NS40 1196 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 CNTNAP1P78357 1384 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 TMEM150BA6NC51 233 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 ANKRD62A6NC57 917 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 A6NNZ2 444 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
RFC3-201ENST00000380071 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
RFC3-201ENST00000380071 GCLMP48507 274 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 SETQ01105 290 aaPredicted RBP13.16□□□□□ -0.3
RFC3-201ENST00000380071 KIF22Q14807 665 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 TUBB8Q3ZCM7 444 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 LRIG3Q6UXM1 1119 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 C1orf131Q8NDD1 294 aaKnown RBP13.16□□□□□ -0.3
RFC3-201ENST00000380071 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 ALG3Q92685 438 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
RFC3-201ENST00000380071 BCCIPQ9P287 314 aaKnown RBP eCLIP13.16□□□□□ -0.3
RFC3-201ENST00000380071 TTC7AQ9ULT0 858 aaPredicted RBP13.16□□□□□ -0.3
RFC3-201ENST00000380071 MYO1FO00160 1098 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 MYZAPP0CAP1 466 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 INPP5BP32019 993 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 TBC1D10BQ4KMP7 808 aaPredicted RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 C1orf220Q5T0J3 134 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 EFCAB13Q8IY85 973 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 PLEKHO2Q8TD55 490 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 SEC14L1Q92503 715 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 KAT5Q92993 513 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 EPN3Q9H201 632 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 SCAF8Q9UPN6 1271 aaKnown RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 UTP11Q9Y3A2 253 aaKnown RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 ZHX2Q9Y6X8 837 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 COL2A1P02458 1487 aaPredicted RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 GOLGA6L10A6NI86 522 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 NFIBO00712 420 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 FTLP02792 175 aaPredicted RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 CCDC172P0C7W6 258 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 KRT13P13646 458 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 VAMP7P51809 220 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 PTGISQ16647 500 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 TTC31Q49AM3 519 aaPredicted RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 ZNF746Q6NUN9 644 aaPredicted RBP13.15□□□□□ -0.3
RFC3-201ENST00000380071 TMC3Q7Z5M5 1100 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 GLG1Q92896 1179 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 RIT2Q99578 217 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 ACP6Q9NPH0 428 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 ALG6Q9Y672 507 aa13.15□□□□□ -0.3
RFC3-201ENST00000380071 A0A087WUV0 522 aaPredicted RBP13.14□□□□□ -0.31
RFC3-201ENST00000380071 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
RFC3-201ENST00000380071 CAP2P40123 477 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 LIG3P49916 1009 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 DHX9Q08211 1270 aaKnown RBP13.14□□□□□ -0.31
RFC3-201ENST00000380071 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
RFC3-201ENST00000380071 FAM160B2Q86V87 743 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
RFC3-201ENST00000380071 MICALL1Q8N3F8 863 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 ATP8B4Q8TF62 1192 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 CCPG1Q9ULG6 757 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 ZNF536O15090 1300 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 BCRP11274 1271 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 USP8P40818 1118 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 RARRES1P49788 294 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 HSD17B4P51659 736 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 PTENP60484 403 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 SPP2Q13103 211 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 TADA2BQ86TJ2 420 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 KRT35Q92764 455 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 CARD9Q9H257 536 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
RFC3-201ENST00000380071 LARSQ9P2J5 1176 aaKnown RBP13.14□□□□□ -0.31
RFC3-201ENST00000380071 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 TMEM110-MUSTN1A8MSY1 372 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 DCDC2CA8MYV0 355 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 PLA2G6O60733 806 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 SGPL1O95470 568 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 HMGB2P26583 209 aaKnown RBP13.13□□□□□ -0.31
RFC3-201ENST00000380071 TMOD1P28289 359 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 PTGER2P43116 358 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 MARCKSL1P49006 195 aa13.13□□□□□ -0.31
RFC3-201ENST00000380071 DGKZQ13574 1117 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms