RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 ZSWIM2Q8NEG5 633 aa21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 TRIM51Q9BSJ1 452 aa21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 FAM160B2Q86V87 743 aa21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 TMEM39BQ9GZU3 492 aa21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
SHROOM1-202ENST00000378676 C21orf2O43822 256 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 ZEB2O60315 1214 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 RAD17O75943 681 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 COPB2P35606 906 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 PPP3CAQ08209 521 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 ITGB3BPQ13352 177 aaPredicted RBP21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 RSBN1LQ6PCB5 846 aaPredicted RBP21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 LRIG3Q6UXM1 1119 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 MIER3Q7Z3K6 550 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 C1orf131Q8NDD1 294 aaKnown RBP21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 RIT2Q99578 217 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 DPH5Q9H2P9 285 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 VEZTQ9HBM0 779 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 HMGB1P1B2RPK0 211 aaPredicted RBP21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 EBAG9O00559 213 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 HSD17B4P51659 736 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 ZNF844Q08AG5 666 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 ZNF211Q13398 564 aaPredicted RBP21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 EMC10Q5UCC4 262 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 ADAT2Q7Z6V5 191 aaKnown RBP21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 SH2D3AQ9BRG2 576 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 CBWD1Q9BRT8 395 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 ERVK-5Q9HDB9 667 aa21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 TTC7AQ9ULT0 858 aaPredicted RBP21.14■□□□□ 0.97
SHROOM1-202ENST00000378676 ZNF536O15090 1300 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 NFIBO00712 420 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 PLA2G6O60733 806 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 LSP1P33241 339 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 DLGAP5Q15398 846 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 C1orf220Q5T0J3 134 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 PLEKHO2Q8TD55 490 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 SEC14L1Q92503 715 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 LRRC45Q96CN5 670 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 AGPAT1Q99943 283 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 KCNH7Q9NS40 1196 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 ZBTB12Q9Y330 459 aaPredicted RBP21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 FAM169AQ9Y6X4 670 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 RPTORQ8N122 1335 aa21.13■□□□□ 0.97
SHROOM1-202ENST00000378676 DHX15O43143 795 aaKnown RBP21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 CAP2P40123 477 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 PRPF4BQ13523 1007 aaKnown RBP21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 SPDYE2Q495Y8 402 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 NEK9Q8TD19 979 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 ATP8B4Q8TF62 1192 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 ALG3Q92685 438 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 CENPHQ9H3R5 247 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 UBE2TQ9NPD8 197 aaPredicted RBP21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 FEM1BQ9UK73 627 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 CCPG1Q9ULG6 757 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 ZHX2Q9Y6X8 837 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 TMEM150BA6NC51 233 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 ANKRD62A6NC57 917 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 KRT13P13646 458 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 INPP5BP32019 993 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 CTNNA1P35221 906 aaKnown RBP21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 SPP2Q13103 211 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 CCDC26Q8TAB7 109 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 UBLCP1Q8WVY7 318 aaPredicted RBP21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 KAT5Q92993 513 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 GMLQ99445 158 aa21.12■□□□□ 0.97
SHROOM1-202ENST00000378676 MYO1FO00160 1098 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 NDUFAB1O14561 156 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 GCLMP48507 274 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 TBC1D10BQ4KMP7 808 aaPredicted RBP21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 EPC2Q52LR7 807 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 AADACL2Q6P093 401 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 TMC3Q7Z5M5 1100 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 SUPT20HQ8NEM7 779 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 TRIM31Q9BZY9 425 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 TMOD4Q9NZQ9 345 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 CCDC172P0C7W6 258 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 HPDP32754 393 aaPredicted RBP21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 PTGER2P43116 358 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 BAG6P46379 1132 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 VAMP7P51809 220 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 MYBPC2Q14324 1141 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 DEFB129Q9H1M3 183 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 CARD9Q9H257 536 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 LRRC4CQ9HCJ2 640 aa21.11■□□□□ 0.97
SHROOM1-202ENST00000378676 A6NNZ2 444 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 RFX1P22670 979 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 RARRES1P49788 294 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 PTENP60484 403 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 IRX3P78415 501 aaPredicted RBP21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 PPARDQ03181 441 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 PTGISQ16647 500 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 TUBB8Q3ZCM7 444 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 ZNF746Q6NUN9 644 aaPredicted RBP21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 INTS8Q75QN2 995 aaKnown RBP21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 EFCAB13Q8IY85 973 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 CLEC4DQ8WXI8 215 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 ICAM1P05362 532 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 P4HBP07237 508 aaKnown RBP21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 BCRP11274 1271 aa21.1■□□□□ 0.97
SHROOM1-202ENST00000378676 MDH1P40925 334 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms