RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 VCPKMTQ9H867 229 aa11.46□□□□□ -0.57
SMC3-201ENST00000361804 MGAMO43451 1857 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 LRRC14Q15048 493 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 DAB2IPQ5VWQ8 1189 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 CCDC121Q6ZUS5 278 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 CPLX4Q7Z7G2 160 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 ARHGEF19Q8IW93 802 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 KIRREL3Q8IZU9 778 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 SLC30A5Q8TAD4 765 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 MGARPQ8TDB4 240 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 TBC1D22AQ8WUA7 517 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 PRMT6Q96LA8 375 aaPredicted RBP11.46□□□□□ -0.58
SMC3-201ENST00000361804 ZC3H12CQ9C0D7 883 aaKnown RBP11.46□□□□□ -0.58
SMC3-201ENST00000361804 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.58
SMC3-201ENST00000361804 SCAF8Q9UPN6 1271 aaKnown RBP11.46□□□□□ -0.58
SMC3-201ENST00000361804 OTOFQ9HC10 1997 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 PITPNM2Q9BZ72 1349 aa11.46□□□□□ -0.58
SMC3-201ENST00000361804 CTNND1O60716 968 aaKnown RBP11.45□□□□□ -0.58
SMC3-201ENST00000361804 CREB1P16220 341 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 SLC29A2Q14542 456 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 FBXO11Q86XK2 927 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 RASGEF1CQ8N431 466 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 SCLT1Q96NL6 688 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 DBR1Q9UK59 544 aaKnown RBP11.45□□□□□ -0.58
SMC3-201ENST00000361804 ZBTB21Q9ULJ3 1066 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 SUGT1Q9Y2Z0 365 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 SLITRK3O94933 977 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 HLA-DOAP06340 250 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 CHN1P15882 459 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 FAM228AQ86W67 206 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 CEP57Q86XR8 500 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 SLFN12Q8IYM2 578 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 CTNNBL1Q8WYA6 563 aaPredicted RBP11.45□□□□□ -0.58
SMC3-201ENST00000361804 INTS2Q9H0H0 1204 aaKnown RBP11.45□□□□□ -0.58
SMC3-201ENST00000361804 KLC4Q9NSK0 619 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 G3V3G9 751 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 EGFRP00533 1210 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 MESDQ14696 234 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 C2CD6Q53TS8 623 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 PWWP2AQ96N64 755 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 PSMD1Q99460 953 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 FAM118BQ9BPY3 351 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 CYP3A7-CYP3A51PA0A087WV96 503 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 GH2P01242 217 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 CYP3A7P24462 503 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 GCLMP48507 274 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 NT5C2P49902 561 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 AOC3Q16853 763 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 ZDHHC24Q6UX98 284 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 VPS36Q86VN1 386 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 JAMLQ86YT9 394 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 ZKSCAN4Q969J2 545 aaPredicted RBP11.45□□□□□ -0.58
SMC3-201ENST00000361804 AMNQ9BXJ7 453 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 ZDHHC18Q9NUE0 388 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
SMC3-201ENST00000361804 GOLGA8IPA6NC78 632 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 GOLGA8JA6NMD2 632 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 ECE2O60344 883 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 RPL21P46778 160 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 PPATQ06203 517 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 POTEAQ6S8J7 498 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 LRIG3Q6UXM1 1119 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 CCDC26Q8TAB7 109 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 FIZ1Q96SL8 496 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 UBE2TQ9NPD8 197 aaPredicted RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 CTTNBP2NLQ9P2B4 639 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 ALG6Q9Y672 507 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 BZW2Q9Y6E2 419 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 TNFAIP3P21580 790 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 MMP14P50281 582 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 IFI16Q16666 785 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 ANKRD20A8PQ5CZ79 823 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 ODR4Q5SWX8 454 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 RFFLQ8WZ73 363 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 MASTLQ96GX5 879 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 DAAM1Q9Y4D1 1078 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 MKI67P46013 3256 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 ARP10275 920 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 DRD4P21917 467 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 PSMC2P35998 433 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 EMC10Q5UCC4 262 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 TEKT1Q969V4 418 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 ZBED3Q96IU2 234 aaPredicted RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 CALR3Q96L12 384 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 PRMT1Q99873 361 aaKnown RBP11.44□□□□□ -0.58
SMC3-201ENST00000361804 MRIQ9BWK5 157 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 ADAM7Q9H2U9 754 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 AGPAT3Q9NRZ7 376 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 SIP14410 1827 aa11.44□□□□□ -0.58
SMC3-201ENST00000361804 EXOC3O60645 756 aa11.43□□□□□ -0.58
SMC3-201ENST00000361804 FTLP02792 175 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms