RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 CYP26B1Q9NR63 512 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
SQSTM1-201ENST00000360718 UBE4BO95155 1302 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 NKRFO15226 690 aaKnown RBP eCLIP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 TRPA1O75762 1119 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 NDUFA10O95299 355 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 GH1P01241 217 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ZNF865P0CJ78 1059 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 MARK3P27448 753 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 RGS2P41220 211 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 KRT83P78385 493 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 KNOP1Q1ED39 458 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 MTERF2Q49AM1 385 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 FAM102BQ5T8I3 360 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 KSR1Q8IVT5 923 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 SLC17A8Q8NDX2 589 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 PDLIM7Q9NR12 457 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 BRCA2P51587 3418 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 MAP2K7O14733 419 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 PRPF6O94906 941 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 PLS3P13797 630 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ARHGAP25P42331 645 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 FKBP3Q00688 224 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ALCAMQ13740 583 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ZCWPW2Q504Y3 356 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ZC2HC1CQ53FD0 456 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 RETREG2Q8NC44 543 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 AFG1LQ8WV93 481 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 KIFAP3Q92845 792 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 KCTD10Q9H3F6 313 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ANKZF1Q9H8Y5 726 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 ZNHIT6Q9NWK9 470 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 RNF186Q9NXI6 227 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 MYO6Q9UM54 1294 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 CAPN11Q9UMQ6 739 aa14.39□□□□□ -0.11
SQSTM1-201ENST00000360718 EVPLQ92817 2033 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 A0A0U1RQJ8 604 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 ERICH4A6NGS2 130 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 PES1O00541 588 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 CALUO43852 315 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 MAPTP10636 758 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 FCGRTP55899 365 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 BMT2Q1RMZ1 405 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 OLFML2BQ68BL8 750 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 ZNF720Q7Z2F6 126 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 EHBP1Q8NDI1 1231 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 ATRIPQ8WXE1 791 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 DNAJC7Q99615 494 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 SMARCAD1Q9H4L7 1026 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 ATP6V0A4Q9HBG4 840 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 EMSYQ7Z589 1322 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 SLC26A2P50443 739 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 SMTNP53814 917 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 POLGP54098 1239 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 TARBP2Q15633 366 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 EDRF1Q3B7T1 1238 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 IQSEC1Q6DN90 963 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 PLPPR4Q7Z2D5 763 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 BSNDQ8WZ55 320 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 CNOT6LQ96LI5 555 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 NIFKQ9BYG3 293 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 C17orf75Q9HAS0 396 aa14.38□□□□□ -0.11
SQSTM1-201ENST00000360718 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 ZBTB42B2RXF5 422 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 K7ENM7 598 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 RNF225M0QZC1 329 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 PDXKO00764 312 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 IPO7O95373 1038 aaKnown RBP14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 MCM3P25205 808 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 CYLC1P35663 651 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 MTIF2P46199 727 aaKnown RBP14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 FLT3LGP49771 235 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 PRKCZQ05513 592 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 IRF5Q13568 498 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 BEND6Q5SZJ8 279 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 ZNF662Q6ZS27 426 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 SLC7A3Q8WY07 619 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 TRIB2Q92519 343 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 IQCDQ96DY2 449 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 CEP63Q96MT8 703 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 ACBD3Q9H3P7 528 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 TYW1Q9NV66 732 aaKnown RBP14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 KCNG1Q9UIX4 513 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 PPME1Q9Y570 386 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 THSD7BQ9C0I4 1608 aa14.37□□□□□ -0.11
SQSTM1-201ENST00000360718 PPP1R37O75864 691 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 GNA14O95837 355 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 RPL13P26373 211 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 RFC5P40937 340 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 SP3Q02447 781 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 TNFAIP2Q03169 654 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 DMP1Q13316 513 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 PLCB4Q15147 1175 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 LRRC55Q6ZSA7 311 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 EXOC8Q8IYI6 725 aa14.36□□□□□ -0.11
SQSTM1-201ENST00000360718 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms