RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 MYOZ2Q9NPC6 264 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 UBE2TQ9NPD8 197 aaPredicted RBP23.22■■□□□ 1.31
CCDC38-201ENST00000344280 CWC15Q9P013 229 aaKnown RBP23.22■■□□□ 1.31
CCDC38-201ENST00000344280 NCANO14594 1321 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 ASTN2O75129 1339 aaPredicted RBP23.22■■□□□ 1.31
CCDC38-201ENST00000344280 KRIT1O00522 736 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 BACH1O14867 736 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 VAMP7P51809 220 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 PPATQ06203 517 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 PPFIA1Q13136 1202 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 SKIDA1Q1XH10 827 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 DCAF12L1Q5VU92 463 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 TTC19Q6DKK2 380 aaPredicted RBP23.22■■□□□ 1.31
CCDC38-201ENST00000344280 KAT5Q92993 513 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 SLC38A10Q9HBR0 1119 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 DBR1Q9UK59 544 aaKnown RBP23.22■■□□□ 1.31
CCDC38-201ENST00000344280 COG5Q9UP83 839 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 NR2E1Q9Y466 385 aa23.22■■□□□ 1.31
CCDC38-201ENST00000344280 TULP2O00295 520 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 WDR46O15213 610 aaKnown RBP23.21■■□□□ 1.31
CCDC38-201ENST00000344280 IVLP07476 585 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 MYCLP12524 364 aaPredicted RBP23.21■■□□□ 1.31
CCDC38-201ENST00000344280 KRT13P13646 458 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 SYCE1Q8N0S2 351 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 TEPSINQ96N21 525 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 NEUROG2Q9H2A3 272 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 TAF1DQ9H5J8 278 aaPredicted RBP23.21■■□□□ 1.31
CCDC38-201ENST00000344280 HSPBP1Q9NZL4 362 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 AMACRQ9UHK6 382 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 LOXHD1Q8IVV2 1947 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 FER1L6Q2WGJ9 1857 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 SLC16A4O15374 487 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 TNFAIP3P21580 790 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 KIF22Q14807 665 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 TNIP1Q15025 636 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 PGM5Q15124 567 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 CFAP58Q5T655 872 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 PLA2G4FQ68DD2 849 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 INTS8Q75QN2 995 aaKnown RBP23.21■■□□□ 1.31
CCDC38-201ENST00000344280 NIPA1Q7RTP0 329 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 HAUS6Q7Z4H7 955 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 MCF2L2Q86YR7 1114 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 MREGQ8N565 214 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 CTNNBL1Q8WYA6 563 aaPredicted RBP23.21■■□□□ 1.31
CCDC38-201ENST00000344280 WNK4Q96J92 1243 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 ACCSQ96QU6 501 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 ISCUQ9H1K1 167 aa23.21■■□□□ 1.31
CCDC38-201ENST00000344280 TULP1O00294 542 aaPredicted RBP23.2■■□□□ 1.3
CCDC38-201ENST00000344280 CCNE2O96020 404 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 PEX3P56589 373 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 HLTFQ14527 1009 aaKnown RBP eCLIP23.2■■□□□ 1.3
CCDC38-201ENST00000344280 CALR3Q96L12 384 aaKnown RBP23.2■■□□□ 1.3
CCDC38-201ENST00000344280 TMEM206Q9H813 350 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 AMFRQ9UKV5 643 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 GOLGA8IPA6NC78 632 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 GOLGA8JA6NMD2 632 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 DDX3YO15523 660 aaKnown RBP23.2■■□□□ 1.3
CCDC38-201ENST00000344280 IRAK1P51617 712 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 GHRHRQ02643 423 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 MYBPC2Q14324 1141 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 WHAMMQ8TF30 809 aa23.2■■□□□ 1.3
CCDC38-201ENST00000344280 EPC2Q52LR7 807 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 NAA35Q5VZE5 725 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 AGPAT1Q99943 283 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 KIFC3Q9BVG8 833 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 CELF4Q9BZC1 486 aaKnown RBP23.19■■□□□ 1.3
CCDC38-201ENST00000344280 RABEP2Q9H5N1 569 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 CHORDC1Q9UHD1 332 aaPredicted RBP23.19■■□□□ 1.3
CCDC38-201ENST00000344280 RSPH14Q9UHP6 348 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 RGPD3A6NKT7 1758 aaPredicted RBP23.19■■□□□ 1.3
CCDC38-201ENST00000344280 RGPD4Q7Z3J3 1758 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 FGGP02679 453 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 ADRB2P07550 413 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 VCAM1P19320 739 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 GTF2BQ00403 316 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 MTMR2Q13614 643 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 XXYLT1Q8NBI6 393 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 LPAR1Q92633 364 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 KIAA1683Q9H0B3 1180 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 ACP6Q9NPH0 428 aa23.19■■□□□ 1.3
CCDC38-201ENST00000344280 BHMG1C9JSJ3 638 aaPredicted RBP23.18■■□□□ 1.3
CCDC38-201ENST00000344280 MAPTP10636 758 aaKnown RBP23.18■■□□□ 1.3
CCDC38-201ENST00000344280 ZNF746Q6NUN9 644 aaPredicted RBP23.18■■□□□ 1.3
CCDC38-201ENST00000344280 CAPS2Q9BXY5 557 aa23.18■■□□□ 1.3
CCDC38-201ENST00000344280 GRIN2DO15399 1336 aa23.18■■□□□ 1.3
CCDC38-201ENST00000344280 TTI1O43156 1089 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 LYPLA2O95372 231 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 FLT3P36888 993 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 SRLQ86TD4 932 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 RMDN3Q96TC7 470 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 ANKRD62A6NC57 917 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 CCDC172P0C7W6 258 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 ADSSP30520 456 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 COPB2P35606 906 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 HSPA9P38646 679 aaKnown RBP23.17■■□□□ 1.3
CCDC38-201ENST00000344280 FAM102BQ5T8I3 360 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 ADAT2Q7Z6V5 191 aaKnown RBP23.17■■□□□ 1.3
CCDC38-201ENST00000344280 PDCD2LQ9BRP1 358 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 TMEM117Q9H0C3 514 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 TBC1D22BQ9NU19 505 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms