RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 NOP53Q9NZM5 478 aaKnown RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 TCRBV7S2A1N4TA0A589 114 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 EME2A4GXA9 379 aaPredicted RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 USP17L10C9JJH3 530 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 H3BRB1 525 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 PPP1R12AO14974 1030 aaPredicted RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 GH1P01241 217 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 MMP13P45452 471 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 DUPD1Q68J44 220 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 ZNF570Q96NI8 536 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 ADAM33Q9BZ11 813 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 TUT1Q9H6E5 874 aaKnown RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 PSTPIP2Q9H939 334 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 ZDHHC18Q9NUE0 388 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 RASAL2Q9UJF2 1139 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 DNAJC12Q9UKB3 198 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 SLC12A4Q9UP95 1085 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 STXBP5LQ9Y2K9 1186 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 PTENP60484 403 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 KLRC3Q07444 240 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 COG2Q14746 738 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 KNOP1Q1ED39 458 aaKnown RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 ZC2HC1CQ53FD0 456 aaPredicted RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 DHX36Q9H2U1 1008 aaKnown RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 USP40Q9NVE5 1235 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 MTRF1LQ9UGC7 380 aaKnown RBP8.5□□□□□ -1.05
VMA21-201ENST00000330374 PCDHA2Q9Y5H9 948 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 RPTORQ8N122 1335 aa8.5□□□□□ -1.05
VMA21-201ENST00000330374 TMEM120BA0PK00 339 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 H0Y3Z8 333 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 CES2O00748 559 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 KIAA0391O15091 583 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 RARAP10276 462 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 SATB1Q01826 763 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 EPHA7Q15375 998 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ZDHHC24Q6UX98 284 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 PIGWQ7Z7B1 504 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ADGRF4Q8IZF3 695 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 RASGEF1CQ8N431 466 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 PIGOQ8TEQ8 1089 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 NT5C3AQ9H0P0 336 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ZNF287Q9HBT7 754 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ARAP2Q8WZ64 1704 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 PAPPAQ13219 1627 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 DDX3YO15523 660 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 PPP1R11O60927 126 aaPredicted RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 MAPK7Q13164 816 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 CAPRIN2Q6IMN6 1127 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 CCDC137Q6PK04 289 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 P3H4Q92791 437 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ARHGEF2Q92974 986 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 HOOK2Q96ED9 719 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 PWWP2AQ96N64 755 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 BHMT2Q9H2M3 363 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 COG5Q9UP83 839 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 LRP5O75197 1615 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ASAP2O43150 1006 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 KCNQ2O43526 872 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 CHMP2AO43633 222 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ZBTB48P10074 688 aaPredicted RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 NMT1P30419 496 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 POU5F1Q01860 360 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 BIRC2Q13490 618 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 CNGA2Q16280 664 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 TBC1D10BQ4KMP7 808 aaPredicted RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 C6orf118Q5T5N4 469 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 TTC27Q6P3X3 843 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 PHLDB2Q86SQ0 1253 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 EIF1ADQ8N9N8 165 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 SLC20A1Q8WUM9 679 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 RFFLQ8WZ73 363 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
VMA21-201ENST00000330374 ZBTB10Q96DT7 871 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 USP15Q9Y4E8 981 aaPredicted RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 ALG6Q9Y672 507 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ANKRD33BA6NCL7 494 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 ZBBXA8MT70 800 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 CALUO43852 315 aaPredicted RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 SNX3O60493 162 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 RTN2O75298 545 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 TBCAO75347 108 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 PDHA1P08559 390 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 AKR1B1P15121 316 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 HOXD13P35453 343 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 SERPINB4P48594 390 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 PDE6CP51160 858 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
VMA21-201ENST00000330374 NSMFQ6X4W1 530 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 SLC35C1Q96A29 364 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 FAM118BQ9BPY3 351 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 RUSC1Q9BVN2 902 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 JMJD4Q9H9V9 463 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 SIX2Q9NPC8 291 aa8.49□□□□□ -1.05
VMA21-201ENST00000330374 LGR5O75473 907 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 SUN1O94901 812 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 FERP16591 822 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ITIH4Q14624 930 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 SF3B3Q15393 1217 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms