RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 COG5Q9UP83 839 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 ZNF646O15015 1829 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-204ENST00000300862 A0A0A6YYK5 440 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-204ENST00000300862 PPP3CAQ08209 521 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 UAP1Q16222 522 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-204ENST00000300862 B3GNT9Q6UX72 402 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 ARHGEF19Q8IW93 802 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 OGFOD1Q8N543 542 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 MREGQ8N565 214 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 RFFLQ8WZ73 363 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 ELMO3Q96BJ8 720 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 TRIM51Q9BSJ1 452 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 ACP6Q9NPH0 428 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 GPRC5CQ9NQ84 441 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 MYH11P35749 1972 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 GOLGA8IPA6NC78 632 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 GOLGA8JA6NMD2 632 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 PPP1R37O75864 691 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 HPDP32754 393 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-204ENST00000300862 HSPA9P38646 679 aaKnown RBP13.97□□□□□ -0.17
HIF3A-204ENST00000300862 TRAF1Q13077 416 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 ITGB3BPQ13352 177 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-204ENST00000300862 NFIL3Q16649 462 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 SYCE1Q8N0S2 351 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 LMO3Q8TAP4 145 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 NCAPGQ9BPX3 1015 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 EHMT1Q9H9B1 1298 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 TMOD4Q9NZQ9 345 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 INTUQ9ULD6 942 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 ZHX2Q9Y6X8 837 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 TMEM110-MUSTN1A8MSY1 372 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 TMEM253P0C7T8 217 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 ANXA13P27216 316 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 CAP2P40123 477 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 SPP2Q13103 211 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 FBXW10Q5XX13 1052 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 LARGE2Q8N3Y3 721 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 RASGEF1CQ8N431 466 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 ZNF341Q9BYN7 854 aa13.97□□□□□ -0.17
HIF3A-204ENST00000300862 DDX3YO15523 660 aaKnown RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 NR1D1P20393 614 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 SKOR1P84550 965 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 PPP2R5AQ15172 486 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 KCTD17Q8N5Z5 321 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 PLEKHO2Q8TD55 490 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 UBLCP1Q8WVY7 318 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 ALG3Q92685 438 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 CALR3Q96L12 384 aaKnown RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 STRA6Q9BX79 667 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 PDGFDQ9GZP0 370 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 KIF13BQ9NQT8 1826 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 ZNF536O15090 1300 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 DHX15O43143 795 aaKnown RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 ALAS1P13196 640 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 KRT13P13646 458 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 VAMP7P51809 220 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 PPATQ06203 517 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 SWT1Q5T5J6 900 aaKnown RBP13.96□□□□□ -0.17
HIF3A-204ENST00000300862 GLG1Q92896 1179 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 ATP6V1G3Q96LB4 118 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 LRRC4CQ9HCJ2 640 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 ERVK-5Q9HDB9 667 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 FEM1BQ9UK73 627 aa13.96□□□□□ -0.17
HIF3A-204ENST00000300862 SLC16A4O15374 487 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 CTNNA1P35221 906 aaKnown RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 RARRES1P49788 294 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 CUL1Q13616 776 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 UGCGQ16739 394 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 FAM160B2Q86V87 743 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 GMLQ99445 158 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 RIT2Q99578 217 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 AGPAT1Q99943 283 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 KIFC3Q9BVG8 833 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 RAVER2Q9HCJ3 691 aaKnown RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 NCANO14594 1321 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 NDUFAB1O14561 156 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 ATMINO43313 823 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 FTLP02792 175 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 HNRNPH1P31943 449 aaKnown RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 MARCKSL1P49006 195 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 SEC24CP53992 1094 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 NPEPPSP55786 919 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 NBPF9Q3BBW0 867 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 C1orf220Q5T0J3 134 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 PLA2G4FQ68DD2 849 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 CLEC4DQ8WXI8 215 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 KCND2Q9NZV8 630 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 UBE4BO95155 1302 aa13.95□□□□□ -0.18
HIF3A-204ENST00000300862 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
HIF3A-204ENST00000300862 H0YGN5 161 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 CCDC188H7C350 402 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 P4HBP07237 508 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms