RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 FAM153AQ9UHL3 310 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 NCANO14594 1321 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 SART1O43290 800 aaKnown RBP11.17□□□□□ -0.62
LSG1-201ENST00000265245 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.17□□□□□ -0.62
LSG1-201ENST00000265245 SLC35G2Q8TBE7 412 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 CLEC4DQ8WXI8 215 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 VPS33BQ9H267 617 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 PCIF1Q9H4Z3 704 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 EMSYQ7Z589 1322 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 WNT10BO00744 389 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 P4HA2O15460 535 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 DHX15O43143 795 aaKnown RBP11.17□□□□□ -0.62
LSG1-201ENST00000265245 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
LSG1-201ENST00000265245 SHOX2O60902 331 aaPredicted RBP11.17□□□□□ -0.62
LSG1-201ENST00000265245 PPFIA4O75335 1185 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 VAMP7P51809 220 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 MAP3K10Q02779 954 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 ITGB3BPQ13352 177 aaPredicted RBP11.17□□□□□ -0.62
LSG1-201ENST00000265245 MAATS1Q7Z4T9 603 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 IQCKQ8N0W5 287 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 XXYLT1Q8NBI6 393 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 HES6Q96HZ4 224 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 CAPS2Q9BXY5 557 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 OSGEPQ9NPF4 335 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 STXBP5LQ9Y2K9 1186 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 UBIAD1Q9Y5Z9 338 aa11.17□□□□□ -0.62
LSG1-201ENST00000265245 A6NNZ2 444 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 LYPLA2O95372 231 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 YWHABP31946 246 aaKnown RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 NBPF9Q3BBW0 867 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 TUBB8Q3ZCM7 444 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 PHLDB3Q6NSJ2 640 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 C12orf56Q8IXR9 622 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 RASGEF1CQ8N431 466 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 TIPINQ9BVW5 301 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 GPR88Q9GZN0 384 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 DDX47Q9H0S4 455 aaKnown RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 SLITRK6Q9H5Y7 841 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 MAP3K20Q9NYL2 800 aaKnown RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 ANKRD62A6NC57 917 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 KRT14P02533 472 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 EIF2AK2P19525 551 aaKnown RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 ERVK-9P63128 1117 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 RASA3Q14644 834 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 KIF22Q14807 665 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 SLC17A8Q8NDX2 589 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 SYTL5Q8TDW5 730 aaPredicted RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 ARL8AQ96BM9 186 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 MYCBPQ99417 103 aaPredicted RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 CBWD1Q9BRT8 395 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 UBE2TQ9NPD8 197 aaPredicted RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 LCMT1Q9UIC8 334 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 DIS3Q9Y2L1 958 aaKnown RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 FOXN3O00409 490 aaPredicted RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 GHRHRQ02643 423 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 TNFAIP1Q13829 316 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 LRRC45Q96CN5 670 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 NAP1L3Q99457 506 aaPredicted RBP11.16□□□□□ -0.62
LSG1-201ENST00000265245 KIAA1683Q9H0B3 1180 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 SLC38A10Q9HBR0 1119 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 HSPBP1Q9NZL4 362 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 PNMA2Q9UL42 364 aa11.16□□□□□ -0.62
LSG1-201ENST00000265245 GOLGA6L10A6NI86 522 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 GCLMP48507 274 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 MRPS9P82933 396 aaKnown RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 CXCL9Q07325 125 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 TRADDQ15628 312 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 TTMPQ5BVD1 217 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 SAMD3Q8N6K7 520 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 TMEM174Q8WUU8 243 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 AGPAT1Q99943 283 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 SGIP1Q9BQI5 828 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 MYCLP12524 364 aaPredicted RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 HSPA9P38646 679 aaKnown RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 MXI1P50539 228 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 RPS6P62753 249 aaKnown RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 DLG4P78352 724 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 PRPF4BQ13523 1007 aaKnown RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 TRMT1LQ7Z2T5 733 aaKnown RBP11.15□□□□□ -0.62
LSG1-201ENST00000265245 EGFL6Q8IUX8 553 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 C4orf19Q8IY42 314 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 OLIG1Q8TAK6 271 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 LMO3Q8TAP4 145 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 MYOZ2Q9NPC6 264 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
LSG1-201ENST00000265245 GOLGA6L10A0A0M3HER8 536 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 WDR64B1ANS9 1081 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 TISP43B9A030 160 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 FGGP02679 453 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 DPEP1P16444 411 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 IRAK1P51617 712 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms