RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 SCYL3Q8IZE3 742 aa23.79■■□□□ 1.4
RNF39-201ENST00000244360 U2AF1L4Q8WU68 220 aaKnown RBP23.79■■□□□ 1.4
RNF39-201ENST00000244360 ATG4CQ96DT6 458 aa23.79■■□□□ 1.4
RNF39-201ENST00000244360 TMEM59LQ9UK28 342 aa23.79■■□□□ 1.4
RNF39-201ENST00000244360 CCDC172P0C7W6 258 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 MYCLP12524 364 aaPredicted RBP23.78■■□□□ 1.4
RNF39-201ENST00000244360 BACE1P56817 501 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 DCAF15Q66K64 600 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 SLC17A8Q8NDX2 589 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 REPS2Q8NFH8 660 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 TAF4BQ92750 862 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 PBKQ96KB5 322 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 LTBP3Q9NS15 1303 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 NOP2P46087 812 aaKnown RBP23.78■■□□□ 1.4
RNF39-201ENST00000244360 KIF22Q14807 665 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 DNAJC21Q5F1R6 531 aaKnown RBP23.78■■□□□ 1.4
RNF39-201ENST00000244360 HAUS6Q7Z4H7 955 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 DNAAF5Q86Y56 855 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 USP38Q8NB14 1042 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 SENP7Q9BQF6 1050 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 RNF146Q9NTX7 359 aa23.78■■□□□ 1.4
RNF39-201ENST00000244360 RLFQ13129 1914 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 TISP43B9A030 160 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 TBC1D10BQ4KMP7 808 aaPredicted RBP23.77■■□□□ 1.4
RNF39-201ENST00000244360 ARHGEF16Q5VV41 709 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 PHLDB3Q6NSJ2 640 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 LMBR1Q8WVP7 490 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.77■■□□□ 1.4
RNF39-201ENST00000244360 WNK4Q96J92 1243 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 IWS1Q96ST2 819 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 CBWD1Q9BRT8 395 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 CAPS2Q9BXY5 557 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 STXBP5LQ9Y2K9 1186 aa23.77■■□□□ 1.4
RNF39-201ENST00000244360 PMM2O15305 246 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 DNA2P51530 1060 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 VAMP7P51809 220 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 GALCP54803 685 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 C1orf220Q5T0J3 134 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 NSMFQ6X4W1 530 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 MREGQ8N565 214 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 XXYLT1Q8NBI6 393 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 VTI1AQ96AJ9 217 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 GPRASP2Q96D09 838 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 C12orf42Q96LP6 360 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 CCDC43Q96MW1 224 aaKnown RBP23.76■■□□□ 1.39
RNF39-201ENST00000244360 HSPBP1Q9NZL4 362 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 RIPK3Q9Y572 518 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 TMEM150BA6NC51 233 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 TMEM253P0C7T8 217 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 MAGEA9P43362 315 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 OAZ1P54368 228 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 DLG4P78352 724 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 MRPS25P82663 173 aaKnown RBP23.76■■□□□ 1.39
RNF39-201ENST00000244360 EPC2Q52LR7 807 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 ZNF746Q6NUN9 644 aaPredicted RBP23.76■■□□□ 1.39
RNF39-201ENST00000244360 VSIG10LQ86VR7 867 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 GLYCTKQ8IVS8 523 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 RDH13Q8NBN7 331 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 ACTRT1Q8TDG2 376 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 PCIF1Q9H4Z3 704 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 AS3MTQ9HBK9 375 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 SUCLA2Q9P2R7 463 aaPredicted RBP23.76■■□□□ 1.39
RNF39-201ENST00000244360 CNOT7Q9UIV1 285 aaKnown RBP23.76■■□□□ 1.39
RNF39-201ENST00000244360 USP20Q9Y2K6 914 aa23.76■■□□□ 1.39
RNF39-201ENST00000244360 EMSYQ7Z589 1322 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 KCNK3O14649 394 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 IRAK1P51617 712 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 CORO7P57737 925 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 TNNC1P63316 161 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 SKOR1P84550 965 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 PPP3CAQ08209 521 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 BAATQ14032 418 aaPredicted RBP23.75■■□□□ 1.39
RNF39-201ENST00000244360 SYCE1Q8N0S2 351 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 ZNF280CQ8ND82 737 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 ADAMTS5Q9UNA0 930 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 TRIM66O15016 1216 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 HEXIM1O94992 359 aaKnown RBP23.75■■□□□ 1.39
RNF39-201ENST00000244360 CCND2P30279 289 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 EIF1ADQ8N9N8 165 aaKnown RBP23.75■■□□□ 1.39
RNF39-201ENST00000244360 TSEN2Q8NCE0 465 aaKnown RBP23.75■■□□□ 1.39
RNF39-201ENST00000244360 HVCN1Q96D96 273 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 GOLPH3Q9H4A6 298 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 GPRC5CQ9NQ84 441 aa23.75■■□□□ 1.39
RNF39-201ENST00000244360 TESPA1A2RU30 521 aaPredicted RBP23.74■■□□□ 1.39
RNF39-201ENST00000244360 FZD9O00144 591 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 ZBTB7AO95365 584 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 GLI1P08151 1106 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 PTPRAP18433 802 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 WHAMMQ8TF30 809 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 RFFLQ8WZ73 363 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 HINFPQ9BQA5 517 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 MOV10L1Q9BXT6 1211 aaKnown RBP23.74■■□□□ 1.39
RNF39-201ENST00000244360 TCEAL9Q9UHQ7 104 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 SLC16A4O15374 487 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 MAFGO15525 162 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 PEX3P56589 373 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 CETN1Q12798 172 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 XKR9Q5GH70 373 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 PLEKHO2Q8TD55 490 aa23.74■■□□□ 1.39
RNF39-201ENST00000244360 PHIPQ8WWQ0 1821 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms