RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 COL4A3BPQ9Y5P4 624 aa21.19■□□□□ 0.98
CLN6-221ENST00000637494 A0A0U1RQF3 1178 aa21.18■□□□□ 0.98
CLN6-221ENST00000637494 TXKP42681 527 aa21.18■□□□□ 0.98
CLN6-221ENST00000637494 GUCY1B3Q02153 619 aa21.18■□□□□ 0.98
CLN6-221ENST00000637494 CTTNQ14247 550 aaKnown RBP21.18■□□□□ 0.98
CLN6-221ENST00000637494 TWF2Q6IBS0 349 aaKnown RBP21.18■□□□□ 0.98
CLN6-221ENST00000637494 COLGALT1Q8NBJ5 622 aa21.18■□□□□ 0.98
CLN6-221ENST00000637494 EIF2AK1Q9BQI3 630 aaKnown RBP21.18■□□□□ 0.98
CLN6-221ENST00000637494 UPF2Q9HAU5 1272 aaKnown RBP21.18■□□□□ 0.98
CLN6-221ENST00000637494 PIN4Q9Y237 131 aaKnown RBP21.18■□□□□ 0.98
CLN6-221ENST00000637494 H3BQ06 376 aaPredicted RBP21.17■□□□□ 0.98
CLN6-221ENST00000637494 ASAP2O43150 1006 aa21.17■□□□□ 0.98
CLN6-221ENST00000637494 CSDE1O75534 798 aaKnown RBP21.17■□□□□ 0.98
CLN6-221ENST00000637494 ATP2B1P20020 1258 aa21.17■□□□□ 0.98
CLN6-221ENST00000637494 SPIRE1Q08AE8 756 aa21.17■□□□□ 0.98
CLN6-221ENST00000637494 HYAL1Q12794 435 aa21.17■□□□□ 0.98
CLN6-221ENST00000637494 C8orf34Q49A92 452 aa21.17■□□□□ 0.98
CLN6-221ENST00000637494 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.17■□□□□ 0.98
CLN6-221ENST00000637494 RSPH1Q8WYR4 309 aa21.17■□□□□ 0.98
CLN6-221ENST00000637494 MRPL9Q9BYD2 267 aaKnown RBP21.17■□□□□ 0.98
CLN6-221ENST00000637494 DHX33Q9H6R0 707 aaKnown RBP21.17■□□□□ 0.98
CLN6-221ENST00000637494 WRAP73Q9P2S5 460 aaPredicted RBP21.17■□□□□ 0.98
CLN6-221ENST00000637494 PUF60Q9UHX1 559 aaKnown RBP21.17■□□□□ 0.98
CLN6-221ENST00000637494 KIAA1671Q9BY89 1806 aa21.17■□□□□ 0.98
CLN6-221ENST00000637494 REV3LO60673 3130 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 FNDC1Q4ZHG4 1894 aaPredicted RBP21.16■□□□□ 0.98
CLN6-221ENST00000637494 FGF18O76093 207 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 PPM1AP35813 382 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 RAB27AP51159 221 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 ST3GAL1Q11201 340 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 EMC2Q15006 297 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 SRGAP1Q7Z6B7 1085 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 CASD1Q96PB1 797 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 MTRQ99707 1265 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 TLR9Q9NR96 1032 aa21.16■□□□□ 0.98
CLN6-221ENST00000637494 FSD2A1L4K1 749 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 SLITRK3O94933 977 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 SRGAP2CP0DJJ0 459 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 MCM7P33993 719 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 KRT17Q04695 432 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 COL19A1Q14993 1142 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 PDE12Q6L8Q7 609 aaKnown RBP21.15■□□□□ 0.98
CLN6-221ENST00000637494 KSR1Q8IVT5 923 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 PRPF31Q8WWY3 499 aaKnown RBP21.15■□□□□ 0.98
CLN6-221ENST00000637494 TMEM143Q96AN5 459 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 ZNF558Q96NG5 402 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 FOXP1Q9H334 677 aaPredicted RBP21.15■□□□□ 0.98
CLN6-221ENST00000637494 CWH43Q9H720 699 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 BMP2KQ9NSY1 1161 aaPredicted RBP21.15■□□□□ 0.98
CLN6-221ENST00000637494 ANKEF1Q9NU02 776 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 VCANP13611 3396 aa21.15■□□□□ 0.98
CLN6-221ENST00000637494 CARNS1A5YM72 827 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 GRXCR2A6NFK2 248 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 ST18O60284 1047 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 LYPLA2O95372 231 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 DNAJB1P25685 340 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 PHKA2P46019 1235 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 RBM25P49756 843 aaKnown RBP21.14■□□□□ 0.97
CLN6-221ENST00000637494 NDUFV1P49821 464 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 NCBP1Q09161 790 aaKnown RBP21.14■□□□□ 0.97
CLN6-221ENST00000637494 LAMTOR4Q0VGL1 99 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 ORC2Q13416 577 aaPredicted RBP21.14■□□□□ 0.97
CLN6-221ENST00000637494 CAMK1Q14012 370 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 TFDP1Q14186 410 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 MXD4Q14582 209 aaPredicted RBP21.14■□□□□ 0.97
CLN6-221ENST00000637494 ZNF579Q8NAF0 562 aaKnown RBP21.14■□□□□ 0.97
CLN6-221ENST00000637494 HELQQ8TDG4 1101 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 PGBD4Q96DM1 585 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 TRAIPQ9BWF2 469 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 NOL7Q9UMY1 257 aaKnown RBP21.14■□□□□ 0.97
CLN6-221ENST00000637494 LZTS1Q9Y250 596 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 KIF3AQ9Y496 699 aa21.14■□□□□ 0.97
CLN6-221ENST00000637494 IL9P15248 144 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 SSTR3P32745 418 aaPredicted RBP21.13■□□□□ 0.97
CLN6-221ENST00000637494 RABEP1Q15276 862 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 CTC1Q2NKJ3 1217 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 KCNT2Q6UVM3 1135 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 ERMNQ8TAM6 284 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 MTMR9Q96QG7 549 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 HSD17B14Q9BPX1 270 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 TLE6Q9H808 572 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 IFT122Q9HBG6 1241 aa21.13■□□□□ 0.97
CLN6-221ENST00000637494 DGAT1O75907 488 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 ERLIN2O94905 339 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 IRS1P35568 1242 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 NRIP1P48552 1158 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 PLCB3Q01970 1234 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 ADAM15Q13444 863 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 BMS1Q14692 1282 aaKnown RBP21.12■□□□□ 0.97
CLN6-221ENST00000637494 CLLU1OSQ5K130 101 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 GLB1LQ6UWU2 654 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 RBM23Q86U06 439 aaKnown RBP21.12■□□□□ 0.97
CLN6-221ENST00000637494 ZNF598Q86UK7 904 aaKnown RBP21.12■□□□□ 0.97
CLN6-221ENST00000637494 FERMT3Q86UX7 667 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 FAM178BQ8IXR5 827 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 EFHBQ8N7U6 833 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 RNF149Q8NC42 400 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 FBXO18Q8NFZ0 1043 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 MRPS27Q92552 414 aaKnown RBP21.12■□□□□ 0.97
CLN6-221ENST00000637494 C1QTNF1Q9BXJ1 281 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms