RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 KRIT1O00522 736 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 SUN1O94901 812 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 GJB6O95452 261 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 VIMP08670 466 aaKnown RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 CLTAP09496 248 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 VEGFAP15692 232 aaPredicted RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 HSPA6P17066 643 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 GNA11P29992 359 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 HOXA10P31260 410 aaPredicted RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 GYG1P46976 350 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 PTENP60484 403 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 COPS2P61201 443 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 POLR2FP61218 127 aaKnown RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 TRAF1Q13077 416 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 GRAPQ13588 217 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ACVR2BQ13705 512 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 NONOQ15233 471 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 INF2Q27J81 1249 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 SGSM1Q2NKQ1 1148 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 PARP6Q2NL67 630 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 C6orf132Q5T0Z8 1188 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 RNF43Q68DV7 783 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 FAM196AQ6ZSG2 479 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ASRGL1Q7L266 308 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 TMC4Q7Z404 712 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ADGRA1Q86SQ6 560 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 NT5DC3Q86UY8 548 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 MYOCDQ8IZQ8 938 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 MIGA1Q8NAN2 632 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 TBC1D16Q8TBP0 767 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 GRAPLQ8TC17 118 aaPredicted RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP8B4Q8TF62 1192 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 LARP4BQ92615 738 aaKnown RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 RAD54LQ92698 747 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 GRAMD1AQ96CP6 724 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 TBC1D31Q96DN5 1066 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ZNF570Q96NI8 536 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 RUNDC3BQ96NL0 473 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 PNMA5Q96PV4 448 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 MTMR9Q96QG7 549 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ELAC2Q9BQ52 826 aaKnown RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ERP44Q9BS26 406 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ADAM33Q9BZ11 813 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 TRIM7Q9C029 511 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 DDX47Q9H0S4 455 aaKnown RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 NLRC4Q9NPP4 1024 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 LRRC4BQ9NT99 713 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 PRKAG3Q9UGI9 489 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 ADAMTS1Q9UHI8 967 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 KCNG1Q9UIX4 513 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 AMFRQ9UKV5 643 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 PNMA2Q9UL42 364 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 L3MBTL1Q9Y468 752 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 DAAM1Q9Y4D1 1078 aa4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 USP15Q9Y4E8 981 aaPredicted RBP4.52□□□□□ -1.69
PTP4A1-205ENST00000626021 SNED1Q8TER0 1413 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ESYT2A0FGR8 921 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PALM3A6NDB9 673 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 DCDC2CA8MYV0 355 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 hCG_1984214I3L0E3 225 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PODXLO00592 558 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 RGS16O15492 202 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 TTI1O43156 1089 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 DIAPH2O60879 1101 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP2C2O75185 946 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 UBOX5O94941 541 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NPTXRO95502 500 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 GGPS1O95749 300 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 H2AFZP0C0S5 128 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 LINGO3P0C6S8 592 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NEFHP12036 1026 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 CCNB1P14635 433 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP2A2P16615 1042 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 KLRK1P26718 216 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PDE6BP35913 854 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 MSH2P43246 934 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ALDH5A1P51649 535 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 KCNQ4P56696 695 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 MRPS35P82673 323 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 LACTBP83111 547 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ATP11AP98196 1134 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PPATQ06203 517 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 KLRC3Q07444 240 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 CNGA2Q16280 664 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 EDRF1Q3B7T1 1238 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 TMEM119Q4V9L6 283 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 CAVIN4Q5BKX8 364 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 KIAA1755Q5JYT7 1200 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 SPDYAQ5MJ70 313 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 HYIQ5T013 277 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 CWF19L1Q69YN2 538 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PRR5LQ6MZQ0 368 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ALKBH5Q6P6C2 394 aaKnown RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 H2AFVQ71UI9 128 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PEX26Q7Z412 305 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 APBB1IPQ7Z5R6 666 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 FRMD5Q7Z6J6 570 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 NEK8Q86SG6 692 aa4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 PNMA8AQ86V59 439 aaPredicted RBP4.51□□□□□ -1.69
PTP4A1-205ENST00000626021 ZNF713Q8N859 430 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms