RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 KCNG1Q9UIX4 513 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 GOLGA8SH3BPF8 625 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 TMEM191BP0C7N4 346 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 IL1R1P14778 569 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 BFSP1Q12934 665 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 SPP2Q13103 211 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 ACER1Q8TDN7 264 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 FAM213AQ9BRX8 229 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 DNAI2Q9GZS0 605 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 HERC5Q9UII4 1024 aaKnown RBP13.83□□□□□ -0.2
MSH6-215ENST00000622629 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
MSH6-215ENST00000622629 ZNF233A6NK53 670 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 SHMT1P34896 483 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 PRPF38AQ8NAV1 312 aaKnown RBP13.83□□□□□ -0.2
MSH6-215ENST00000622629 TRIM7Q9C029 511 aa13.83□□□□□ -0.2
MSH6-215ENST00000622629 MIF4GDA9UHW6 222 aaKnown RBP13.82□□□□□ -0.2
MSH6-215ENST00000622629 H0YCG3 227 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
MSH6-215ENST00000622629 CYP26A1O43174 497 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 AKAP3O75969 853 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 COPB2P35606 906 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 PBX1P40424 430 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 RHBDL3P58872 404 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 OSTNP61366 133 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 PPP1R21Q6ZMI0 780 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 STK33Q9BYT3 514 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 ANAPC5Q9UJX4 755 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 K7ERI5 159 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 GBP1P32455 592 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 MEA1Q16626 185 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 NCAPG2Q86XI2 1143 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 CTAGE3PQ8IX95 158 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 C4orf32Q8N8J7 132 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 FERMT1Q9BQL6 677 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 TUFT1Q9NNX1 390 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 APEX2Q9UBZ4 518 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 SYNGAP1Q96PV0 1343 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 WDR64B1ANS9 1081 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 FGRP09769 529 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 CDK17Q00537 523 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 ALCAMQ13740 583 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 GIT2Q14161 759 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 LMBRD2Q68DH5 695 aaPredicted RBP13.82□□□□□ -0.2
MSH6-215ENST00000622629 TRIM59Q8IWR1 403 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 ZFPM1Q8IX07 1006 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 RSAD2Q8WXG1 361 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 MLXIPLQ9NP71 852 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 PSD3Q9NYI0 1048 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 FEM1BQ9UK73 627 aa13.82□□□□□ -0.2
MSH6-215ENST00000622629 PON1P27169 355 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 EIF3BP55884 814 aaKnown RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 DYNLT1P63172 113 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 TFAMQ00059 246 aaKnown RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 NPY5RQ15761 445 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 CEP128Q6ZU80 1094 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 ZNF564Q8TBZ8 553 aaPredicted RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 TCP11Q8WWU5 503 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 ARL8AQ96BM9 186 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 NUP85Q9BW27 656 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 NXF1Q9UBU9 619 aaKnown RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 NAA25Q14CX7 972 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 ZBTB8OSQ8IWT0 167 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 AGPAT1Q99943 283 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 TACO1Q9BSH4 297 aaKnown RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 KLHL14Q9P2G3 628 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 REXO2Q9Y3B8 237 aaKnown RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 INO80B-WBP1J3KQ70 363 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 SSTR3P32745 418 aaPredicted RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 SCYL2Q6P3W7 929 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 PRMT6Q96LA8 375 aaPredicted RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 SLITRK6Q9H5Y7 841 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 GABBR1Q9UBS5 961 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 ZNF131P52739 623 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 SEC24CP53992 1094 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 IGBP1P78318 339 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 SLC17A8Q8NDX2 589 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 SLC30A5Q8TAD4 765 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 SYN2Q92777 582 aaPredicted RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 C11orf70Q9BRQ4 267 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 MMTAG2Q9BU76 263 aaKnown RBP13.81□□□□□ -0.2
MSH6-215ENST00000622629 TBC1D22BQ9NU19 505 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 LMO7Q8WWI1 1683 aa13.81□□□□□ -0.2
MSH6-215ENST00000622629 SLC16A3O15427 465 aaKnown RBP13.8□□□□□ -0.2
MSH6-215ENST00000622629 PPP1R37O75864 691 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 FAM133BQ5BKY9 247 aaKnown RBP13.8□□□□□ -0.2
MSH6-215ENST00000622629 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 PALM2Q8IXS6 379 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 GDAP1Q8TB36 358 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 HAUS1Q96CS2 278 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms