RNA–Protein interactions for RNA: ENST00000615593.4

ABCA8-215, Transcript of ATP binding cassette subfamily A member 8, human

TSL 5 BASIC

Gene ABCA8, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-215	ENST00000615593	CASQ1	P31415	396 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	TXK	P42681	527 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	AFM	P43652	599 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	QARS	P47897	775 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	APBA1	Q02410	837 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	KYAT1	Q16773	422 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	FAM83B	Q5T0W9	1011 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ARMC3	Q5W041	872 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	CCDC62	Q6P9F0	684 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	FOXD4L3	Q6VB84	417 aa	Predicted RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ANKRD23	Q86SG2	305 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	NT5DC4	Q86YG4	428 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	KIAA0825	Q8IV33	1275 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	TMEM161B	Q8NDZ6	487 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	GOLGA1	Q92805	767 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	NOC4L	Q9BVI4	516 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	AGPAT3	Q9NRZ7	376 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ADARB2	Q9NS39	739 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	TMEM51	Q9NW97	253 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	PCDHA13	Q9Y5I0	950 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	CTAGE9	A4FU28	777 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	WDR64	B1ANS9	1081 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	POTEC	B2RU33	542 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	IPO5	O00410	1097 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	BIN1	O00499	593 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	CETN3	O15182	167 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	EIF3J	O75822	258 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	NR3C1	P04150	777 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	KRT9	P35527	623 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ECE1	P42892	770 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	PSEN2	P49810	448 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ASIC1	P78348	528 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	COG2	Q14746	738 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	PSMD6	Q15008	389 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	RASA2	Q15283	850 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	GPAT2	Q6NUI2	795 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	USP17L6P	Q6QN14	398 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	GPBP1	Q86WP2	473 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	CCDC24	Q8N4L8	307 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	SPC24	Q8NBT2	197 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	C3orf20	Q8ND61	904 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	MCPH1	Q8NEM0	835 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	CXorf38	Q8TB03	319 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	FAM71B	Q8TC56	605 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	SHC3	Q92529	594 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	FGFBP2	Q9BYJ0	223 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	GPCPD1	Q9NPB8	672 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	NOCT	Q9UK39	431 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	ZNF215	Q9UL58	517 aa	Predicted RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	KIAA1024	Q9UPX6	916 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	PCDHA3	Q9Y5H8	950 aa		4.87	□□□□□ -1.63
ABCA8-215	ENST00000615593	hCG_1642624	A0A1W2PR95	340 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	RCCD1	A6NED2	376 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	SPDYE16	A6NNV3	312 aa	Predicted RBP	4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	INPPL1	O15357	1258 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	KIF5C	O60282	957 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	DGAT1	O75907	488 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	AKAP3	O75969	853 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	TBC1D8	O95759	1140 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	CCDC172	P0C7W6	258 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	UCHL3	P15374	230 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	FOSB	P53539	338 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	PSMC6	P62333	389 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	TBC1D8B	Q0IIM8	1120 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	SUPT20HL1	Q3ZLR7	823 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	XKR4	Q5GH76	650 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	LRCH2	Q5VUJ6	765 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	RPAIN	Q86UA6	219 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	NIPA2	Q8N8Q9	360 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	ERCC4	Q92889	916 aa	Predicted RBP	4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	TRIM47	Q96LD4	638 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	GBP3	Q9H0R5	595 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	AGPAT5	Q9NUQ2	364 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	HACL1	Q9UJ83	578 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	DERA	Q9Y315	318 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	ZHX2	Q9Y6X8	837 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	ZNF541	Q9H0D2	1346 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	ZBTB42	B2RXF5	422 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593		B4DLN1	442 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593		E9PMD0	336 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593		F8VZ95	297 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	EPHB6	O15197	1021 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	MAF	O75444	373 aa	Predicted RBP	4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	CCNE2	O96020	404 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	CYP1A1	P04798	512 aa	Predicted RBP	4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	MYBL1	P10243	752 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	HSPA6	P17066	643 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	PAX3	P23760	479 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	POLD1	P28340	1107 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	GBP1	P32455	592 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	NAMPT	P43490	491 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	FMO5	P49326	533 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	CASP5	P51878	434 aa		4.86	□□□□□ -1.63
ABCA8-215	ENST00000615593	KIF11	P52732	1056 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms