RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 BTNL10A8MVZ5 291 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 KRT14P02533 472 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PPP3CAQ08209 521 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 FKBP1CQ5VVH2 108 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PLA2G4FQ68DD2 849 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 STXBP4Q6ZWJ1 553 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 DDX42Q86XP3 938 aaKnown RBP eCLIP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SLC30A5Q8TAD4 765 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 DDX47Q9H0S4 455 aaKnown RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 AGO4Q9HCK5 861 aaKnown RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GDF3Q9NR23 364 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 EMSYQ7Z589 1322 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GOLGA6CA6NDK9 693 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GOLGA6DP0CG33 693 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PRAMEF18Q5VWM3 479 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 TTC19Q6DKK2 380 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 EMBQ6PCB8 327 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 NSMFQ6X4W1 530 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 LEKR1Q6ZMV7 388 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 AGBL3Q8NEM8 1001 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SLC35G2Q8TBE7 412 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 UBE2TQ9NPD8 197 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ACP6Q9NPH0 428 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 LARSQ9P2J5 1176 aaKnown RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 RBBP6Q7Z6E9 1792 aaKnown RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SLC16A4O15374 487 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 YWHABP31946 246 aaKnown RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PEX3P56589 373 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SOX10P56693 466 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 MTMR2Q13614 643 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 NFIL3Q16649 462 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GLE1Q53GS7 698 aaKnown RBP12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 KCTD16Q68DU8 428 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SAMD7Q7Z3H4 446 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 LMO3Q8TAP4 145 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 GOLGA5Q8TBA6 731 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SLC20A1Q8WUM9 679 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 KAT5Q92993 513 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ARHGEF26Q96DR7 871 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 KCND2Q9NZV8 630 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 BACH1O14867 736 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SORBS3O60504 671 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ZBTB48P10074 688 aaPredicted RBP12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 QARSP47897 775 aaKnown RBP12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 NAA35Q5VZE5 725 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 LRRC31Q6UY01 552 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ARHGEF19Q8IW93 802 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PLEKHO2Q8TD55 490 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ZBED3Q96IU2 234 aaPredicted RBP12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 CCDC43Q96MW1 224 aaKnown RBP12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 TEPSINQ96N21 525 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ZIM3Q96PE6 472 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 TMEM59LQ9UK28 342 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 RIPK3Q9Y572 518 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 MUTP22033 750 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 USP8P40818 1118 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PPARDQ03181 441 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SLC38A10Q9HBR0 1119 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 NOC2LQ9Y3T9 749 aaKnown RBP12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 UBIAD1Q9Y5Z9 338 aa12.81□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SART1O43290 800 aaKnown RBP12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 CCNE2O96020 404 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 BCRP11274 1271 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 VCAM1P19320 739 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ERVK-9P63128 1117 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 HLTFQ14527 1009 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 PPP2R5AQ15172 486 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 IFI16Q16666 785 aaKnown RBP12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 HAUS6Q7Z4H7 955 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SH2D3CQ8N5H7 860 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 FAM76AQ8TAV0 307 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 FAM84AQ96KN4 292 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 SYT11Q9BT88 431 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 AMACRQ9UHK6 382 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 WDR46O15213 610 aaKnown RBP12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 KRT13P13646 458 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 TNFAIP3P21580 790 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 COPB2P35606 906 aa12.8□□□□□ -0.36
HMGN3-AS1-201ENST00000604516 VAMP7P51809 220 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms