RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 PUM1Q14671 1186 aaKnown RBP eCLIP16.09■□□□□ 0.17
HCG18-245ENST00000602550 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
HCG18-245ENST00000602550 TTC22Q5TAA0 569 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 TRMT1LQ7Z2T5 733 aaKnown RBP16.09■□□□□ 0.17
HCG18-245ENST00000602550 SIX5Q8N196 739 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 ZNF713Q8N859 430 aaPredicted RBP16.09■□□□□ 0.17
HCG18-245ENST00000602550 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 RMDN1Q96DB5 314 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 IGSF21Q96ID5 467 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 CHST12Q9NRB3 414 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 PCDHA10Q9Y5I2 948 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 EPG5Q9HCE0 2579 aa16.09■□□□□ 0.17
HCG18-245ENST00000602550 WDR81Q562E7 1941 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 SMCO2A6NFE2 343 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 ZC3H11AO75152 810 aaKnown RBP eCLIP16.08■□□□□ 0.16
HCG18-245ENST00000602550 SKIP12755 728 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 DARSP14868 501 aaKnown RBP16.08■□□□□ 0.16
HCG18-245ENST00000602550 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.16
HCG18-245ENST00000602550 RFX1P22670 979 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 CDC42EP1Q00587 391 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 C15orf39Q6ZRI6 1047 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 SCLT1Q96NL6 688 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 ZNF577Q9BSK1 485 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 EMILIN2Q9BXX0 1053 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 NRBP2Q9NSY0 501 aa16.08■□□□□ 0.16
HCG18-245ENST00000602550 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
HCG18-245ENST00000602550 RBM8AQ9Y5S9 174 aaKnown RBP16.08■□□□□ 0.16
HCG18-245ENST00000602550 MED19A0JLT2 244 aaPredicted RBP16.07■□□□□ 0.16
HCG18-245ENST00000602550 FAM86B1E9PN63 330 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 CYP3A4P08684 503 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 FAM86B2P0C5J1 330 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 KLRC2P26717 231 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 GPC3P51654 580 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 LETM2Q2VYF4 491 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 TYW1BQ6NUM6 668 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 ZC3H14Q6PJT7 736 aaKnown RBP16.07■□□□□ 0.16
HCG18-245ENST00000602550 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 KIAA2013Q8IYS2 634 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 LRRC71Q8N4P6 559 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 TRAIPQ9BWF2 469 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 GABBR1Q9UBS5 961 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 CACNA1IQ9P0X4 2223 aa16.07■□□□□ 0.16
HCG18-245ENST00000602550 C2orf16Q68DN1 1984 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 IGLV3-22A0A075B6J6 115 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 GALTP07902 379 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 PHKA2P46019 1235 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 CLK2P49760 499 aaKnown RBP16.06■□□□□ 0.16
HCG18-245ENST00000602550 SETQ01105 290 aaPredicted RBP16.06■□□□□ 0.16
HCG18-245ENST00000602550 RNASELQ05823 741 aaKnown RBP16.06■□□□□ 0.16
HCG18-245ENST00000602550 GLB1LQ6UWU2 654 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 SGMS1Q86VZ5 419 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 TMEM173Q86WV6 379 aaPredicted RBP16.06■□□□□ 0.16
HCG18-245ENST00000602550 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 NLRP7Q8WX94 980 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 NXPE3Q969Y0 559 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
HCG18-245ENST00000602550 NRDE2Q9H7Z3 1164 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
HCG18-245ENST00000602550 CNTNAP5Q8WYK1 1306 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 CLCN4P51793 760 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 TBC1D8BQ0IIM8 1120 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 PTPN14Q15678 1187 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 NOMO2Q5JPE7 1267 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 ELMSAN1Q6PJG2 1045 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 CYP26C1Q6V0L0 522 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 STAMQ92783 540 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 ZNF668Q96K58 619 aaPredicted RBP16.05■□□□□ 0.16
HCG18-245ENST00000602550 KLHL5Q96PQ7 755 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 INO80BQ9C086 356 aaPredicted RBP16.05■□□□□ 0.16
HCG18-245ENST00000602550 TBC1D13Q9NVG8 400 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 BARHL2Q9NY43 387 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 DPP7Q9UHL4 492 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 V9GY48 417 aaPredicted RBP16.05■□□□□ 0.16
HCG18-245ENST00000602550 SPTBN2O15020 2390 aa16.05■□□□□ 0.16
HCG18-245ENST00000602550 FANCMQ8IYD8 2048 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 ACACBO00763 2458 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 OATP04181 439 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 CFHP08603 1231 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 FGFR4P22455 802 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 TWF2Q6IBS0 349 aaKnown RBP16.04■□□□□ 0.16
HCG18-245ENST00000602550 CMASQ8NFW8 434 aaPredicted RBP16.04■□□□□ 0.16
HCG18-245ENST00000602550 CRYGNQ8WXF5 182 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 RUBCNQ92622 972 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 R4GN57 208 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 DMXL1Q9Y485 3027 aa16.04■□□□□ 0.16
HCG18-245ENST00000602550 WDR64B1ANS9 1081 aa16.03■□□□□ 0.16
HCG18-245ENST00000602550 NARSO43776 548 aaKnown RBP16.03■□□□□ 0.16
HCG18-245ENST00000602550 ZNF623O75123 536 aa16.03■□□□□ 0.16
HCG18-245ENST00000602550 SFPQP23246 707 aaKnown RBP eCLIP16.03■□□□□ 0.16
HCG18-245ENST00000602550 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
HCG18-245ENST00000602550 RAB27AP51159 221 aa16.03■□□□□ 0.16
HCG18-245ENST00000602550 LRRC2Q9BYS8 371 aa16.03■□□□□ 0.16
HCG18-245ENST00000602550 RHOBTB2Q9BYZ6 727 aa16.03■□□□□ 0.16
HCG18-245ENST00000602550 WDR6Q9NNW5 1121 aaKnown RBP16.03■□□□□ 0.16
HCG18-245ENST00000602550 MRPL17Q9NRX2 175 aaKnown RBP16.03■□□□□ 0.16
HCG18-245ENST00000602550 DLL3Q9NYJ7 618 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 253.1 ms