RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 NIPA1Q7RTP0 329 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 SIX5Q8N196 739 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 SCLT1Q96NL6 688 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 MAP7D2Q96T17 732 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.32
SF3A2-204ENST00000589118 SAMM50Q9Y512 469 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 WDR87Q6ZQQ6 2873 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 MED19A0JLT2 244 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-204ENST00000589118 PSAPP07602 524 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 CFHP08603 1231 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 RTN1Q16799 776 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 PRR16Q569H4 304 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 CABP7Q86V35 215 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 SGMS1Q86VZ5 419 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 ZNF280BQ86YH2 543 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 PLCD3Q8N3E9 789 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 DTWD2Q8NBA8 298 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 RIN2Q8WYP3 895 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-204ENST00000589118 IGSF21Q96ID5 467 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 KCNK12Q9HB15 430 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 BARHL2Q9NY43 387 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 FBXL21Q9UKT6 434 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 R4GN57 208 aa17.07■□□□□ 0.32
SF3A2-204ENST00000589118 MAGEB2O15479 319 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 CHMP2AO43633 222 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 EDIL3O43854 480 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 N4BP1O75113 896 aaKnown RBP17.06■□□□□ 0.32
SF3A2-204ENST00000589118 GALTP07902 379 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 CYP3A4P08684 503 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 CTSAP10619 480 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 SLC11A1P49279 550 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 AFF1P51825 1210 aaKnown RBP17.06■□□□□ 0.32
SF3A2-204ENST00000589118 AP3B2Q13367 1082 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 TDGQ13569 410 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 ZNF746Q6NUN9 644 aaPredicted RBP17.06■□□□□ 0.32
SF3A2-204ENST00000589118 PPP1R18Q6NYC8 613 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 ERMP1Q7Z2K6 904 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 GPR149Q86SP6 731 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 DDX53Q86TM3 631 aaKnown RBP17.06■□□□□ 0.32
SF3A2-204ENST00000589118 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 RMDN1Q96DB5 314 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 TBC1D22BQ9NU19 505 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 TBC1D13Q9NVG8 400 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 DZANK1Q9NVP4 752 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
SF3A2-204ENST00000589118 A0A087WZ62 844 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 STK25O00506 426 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 OATP04181 439 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
SF3A2-204ENST00000589118 PHKA2P46019 1235 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 PRKCEQ02156 737 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 KSR1Q8IVT5 923 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 KIAA2013Q8IYS2 634 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 FDXACB1Q9BRP7 624 aaPredicted RBP17.05■□□□□ 0.32
SF3A2-204ENST00000589118 NAP1L2Q9ULW6 460 aaPredicted RBP17.05■□□□□ 0.32
SF3A2-204ENST00000589118 ZNF292O60281 2723 aa17.05■□□□□ 0.32
SF3A2-204ENST00000589118 EP300Q09472 2414 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-204ENST00000589118 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 GOLGA8AA7E2F4 631 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 GOLGA8BA8MQT2 603 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 ZBTB43O43298 467 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 OFD1O75665 1012 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 DDHD2O94830 711 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 CNPP09543 421 aaKnown RBP17.04■□□□□ 0.32
SF3A2-204ENST00000589118 KLRC2P26717 231 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 TMOD1P28289 359 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 FAM43BQ6ZT52 329 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-204ENST00000589118 ACSF2Q96CM8 615 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-204ENST00000589118 MRPL9Q9BYD2 267 aaKnown RBP17.04■□□□□ 0.32
SF3A2-204ENST00000589118 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
SF3A2-204ENST00000589118 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 CA14Q9ULX7 337 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 CEP131Q9UPN4 1083 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 COL4A3Q01955 1670 aa17.04■□□□□ 0.32
SF3A2-204ENST00000589118 KLF18A0A0U1RQI7 1052 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 C2CD2LO14523 706 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 CPA1P15085 419 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 CLCN4P51793 760 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 EXOSC10Q01780 885 aaKnown RBP17.03■□□□□ 0.32
SF3A2-204ENST00000589118 RNASELQ05823 741 aaKnown RBP17.03■□□□□ 0.32
SF3A2-204ENST00000589118 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 MTERF2Q49AM1 385 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 NOMO2Q5JPE7 1267 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 TWF2Q6IBS0 349 aaKnown RBP17.03■□□□□ 0.32
SF3A2-204ENST00000589118 CCDC149Q6ZUS6 474 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 TAS1R1Q7RTX1 841 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 SMAP1Q8IYB5 467 aaPredicted RBP17.03■□□□□ 0.32
SF3A2-204ENST00000589118 DCLK2Q8N568 766 aa17.03■□□□□ 0.32
SF3A2-204ENST00000589118 LENG9Q96B70 501 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms