RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SLITRK3O94933 977 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FGFR1P11362 822 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SKIP12755 728 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ATF7P17544 494 aaPredicted RBP19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 RBM25P49756 843 aaKnown RBP19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 NPEPPSP55786 919 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PLCB3Q01970 1234 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 CALCRLQ16602 461 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PTCRAQ6ISU1 281 aaPredicted RBP19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 RHPN2Q8IUC4 686 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 LRRC43Q8N309 656 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 COLGALT1Q8NBJ5 622 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 POF1BQ8WVV4 589 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 CEP170P1Q96L14 293 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SH2D3AQ9BRG2 576 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FDXACB1Q9BRP7 624 aaPredicted RBP19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PRKAG3Q9UGI9 489 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FAM50BQ9Y247 325 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 COL4A3BPQ9Y5P4 624 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 CARNS1A5YM72 827 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ASAP2O43150 1006 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 NEMFO60524 1076 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ZNF623O75123 536 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 POLGP54098 1239 aaPredicted RBP19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ADAM15Q13444 863 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PCBP1Q15365 356 aaKnown RBP eCLIP19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 NCAPH2Q6IBW4 605 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 TCP11Q8WWU5 503 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PSPC1Q8WXF1 523 aaKnown RBP19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 DYDC2Q96IM9 177 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FOXP1Q9H334 677 aaPredicted RBP19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ANKEF1Q9NU02 776 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 CLDND1Q9NY35 253 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 RGL1Q9NZL6 768 aa19.1■□□□□ 0.65
MAP1LC3B-208ENST00000570189 WNT7AO00755 349 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FSCN2O14926 492 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FGF18O76093 207 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PPM1AP35813 382 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PHKA2P46019 1235 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 RAB27AP51159 221 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 POU5F1BQ06416 359 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SAFBQ15424 915 aaKnown RBP eCLIP19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 CLLU1OSQ5K130 101 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 LRRC55Q6ZSA7 311 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SRGAP1Q7Z6B7 1085 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 EFHBQ8N7U6 833 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ZNF579Q8NAF0 562 aaKnown RBP19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ZNF668Q96K58 619 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 EIF2AK1Q9BQI3 630 aaKnown RBP19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 MRPL9Q9BYD2 267 aaKnown RBP19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 TTC12Q9H892 705 aaPredicted RBP19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 TLR9Q9NR96 1032 aa19.09■□□□□ 0.65
MAP1LC3B-208ENST00000570189 XRCC6P12956 609 aaKnown RBP eCLIP19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 FGFR4P22455 802 aa19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 IRS1P35568 1242 aa19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 EMC2Q15006 297 aa19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 IFNLR1Q8IU57 520 aaPredicted RBP19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 ABI1Q8IZP0 508 aa19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 FBXO18Q8NFZ0 1043 aa19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 PRPF31Q8WWY3 499 aaKnown RBP19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 C8orf76Q96K31 380 aa19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CDCA3Q99618 268 aaPredicted RBP19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 AGPAT5Q9NUQ2 364 aa19.08■□□□□ 0.64
MAP1LC3B-208ENST00000570189 C5orf42Q9H799 3197 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 H3BQ06 376 aaPredicted RBP19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TBX10O75333 385 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CSDE1O75534 798 aaKnown RBP19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 EYA4O95677 639 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 IL9P15248 144 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 LAMTOR4Q0VGL1 99 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CTTNQ14247 550 aaKnown RBP19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MXD4Q14582 209 aaPredicted RBP19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SPOUT1Q5T280 376 aaKnown RBP19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 KCNT2Q6UVM3 1135 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 FERMT3Q86UX7 667 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 KSR1Q8IVT5 923 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CCDC83Q8IWF9 413 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 THNSL1Q8IYQ7 743 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MRPS27Q92552 414 aaKnown RBP19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MSLNLQ96KJ4 702 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 NLRP4Q96MN2 994 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 C1QTNF1Q9BXJ1 281 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 HCSTQ9UBK5 93 aa19.07■□□□□ 0.64
MAP1LC3B-208ENST00000570189 DGAT1O75907 488 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TRAPPC10P48553 1259 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CYP4A11Q02928 519 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 DLX2Q07687 328 aaPredicted RBP19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SMAD2Q15796 467 aaKnown RBP19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 XKR9Q5GH70 373 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CATSPER4Q7RTX7 472 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 ADGRD2Q7Z7M1 963 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TPH2Q8IWU9 490 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 ZNF558Q96NG5 402 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MTRQ99707 1265 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 NFKBIZQ9BYH8 718 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 FAM105AQ9NUU6 356 aa19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 PIN4Q9Y237 131 aaKnown RBP19.06■□□□□ 0.64
MAP1LC3B-208ENST00000570189 C19orf67A6NJJ6 358 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms