RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PSPC1Q8WXF1 523 aaKnown RBP17.76■□□□□ 0.43
USB1-215ENST00000569252 KIFAP3Q92845 792 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 SCLYQ96I15 445 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 IFT74Q96LB3 600 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 SCLT1Q96NL6 688 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 WNT8AQ9H1J5 351 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 GOLPH3LQ9H4A5 285 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 ZHX3Q9H4I2 956 aa17.76■□□□□ 0.43
USB1-215ENST00000569252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.75■□□□□ 0.43
USB1-215ENST00000569252 RFXAPO00287 272 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 TBCAO75347 108 aaKnown RBP17.75■□□□□ 0.43
USB1-215ENST00000569252 MBD3O95983 291 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 CD4P01730 458 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 AFMP43652 599 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 TFDP1Q14186 410 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 E2F4Q16254 413 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 KRBA2Q6ZNG9 492 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 C1orf186Q6ZWK4 172 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
USB1-215ENST00000569252 CAGE1Q8TC20 777 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 ADAMTS19Q8TE59 1207 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 CCDC47Q96A33 483 aaKnown RBP17.75■□□□□ 0.43
USB1-215ENST00000569252 TMEM143Q96AN5 459 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 TIGD1Q96MW7 591 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 GAS2L1Q99501 681 aaPredicted RBP17.75■□□□□ 0.43
USB1-215ENST00000569252 KAT6AQ92794 2004 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 SCN10AQ9Y5Y9 1956 aa17.75■□□□□ 0.43
USB1-215ENST00000569252 SCN5AQ14524 2016 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 IGKV6-21A0A0C4DH24 114 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 CAND2O75155 1236 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 NR1I2O75469 434 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 FAM13AO94988 1023 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 MYL1P05976 194 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 GUCY2CP25092 1073 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 CLCN3P51790 818 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 TFF2Q03403 129 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 RAD51AP2Q09MP3 1159 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 HIC1Q14526 733 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 PPP2R5AQ15172 486 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 RUFY4Q6ZNE9 571 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 DYMQ7RTS9 669 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 RHPN2Q8IUC4 686 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 KIAA0319LQ8IZA0 1049 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 TMEM199Q8N511 208 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 DDX12PQ92771 950 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 STAMQ92783 540 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 PAGE5Q96GU1 130 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 IL23AQ9NPF7 189 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 KBTBD4Q9NVX7 518 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 ODF2LQ9ULJ1 636 aa17.74■□□□□ 0.43
USB1-215ENST00000569252 HIP1RO75146 1068 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 SRGAP2CP0DJJ0 459 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 IDEP14735 1019 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 LIG1P18858 919 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 SMTNP53814 917 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 SNW1Q13573 536 aaKnown RBP17.73■□□□□ 0.43
USB1-215ENST00000569252 RPAINQ86UA6 219 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 CCDC65Q8IXS2 484 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 MYCT1Q8N699 235 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 ENGASEQ8NFI3 743 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 PRPF31Q8WWY3 499 aaKnown RBP17.73■□□□□ 0.43
USB1-215ENST00000569252 NLRP7Q8WX94 980 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 ZBTB10Q96DT7 871 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 C7orf25Q9BPX7 421 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 RUSC1Q9BVN2 902 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 POLR3FQ9H1D9 316 aaPredicted RBP17.73■□□□□ 0.43
USB1-215ENST00000569252 HIPK3Q9H422 1215 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 CERS4Q9HA82 394 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 C17orf75Q9HAS0 396 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 DACT1Q9NYF0 836 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 LARSQ9P2J5 1176 aaKnown RBP17.73■□□□□ 0.43
USB1-215ENST00000569252 THEGQ9P2T0 379 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 GINS2Q9Y248 185 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 COL4A3BPQ9Y5P4 624 aa17.73■□□□□ 0.43
USB1-215ENST00000569252 ACTN4O43707 911 aaKnown RBP17.72■□□□□ 0.43
USB1-215ENST00000569252 ARHGEF15O94989 841 aa17.72■□□□□ 0.43
USB1-215ENST00000569252 VTNP04004 478 aa17.72■□□□□ 0.43
USB1-215ENST00000569252 ARL2P36404 184 aa17.72■□□□□ 0.43
USB1-215ENST00000569252 ASIC1P78348 528 aa17.72■□□□□ 0.43
USB1-215ENST00000569252 DMP1Q13316 513 aaPredicted RBP17.72■□□□□ 0.43
USB1-215ENST00000569252 ARSHQ5FYA8 562 aa17.72■□□□□ 0.43
USB1-215ENST00000569252 PSRC1Q6PGN9 363 aaPredicted RBP17.72■□□□□ 0.43
USB1-215ENST00000569252 HERVK_113Q902F9 699 aa17.72■□□□□ 0.43
USB1-215ENST00000569252 ASB2Q96Q27 587 aa17.72■□□□□ 0.43
USB1-215ENST00000569252 INO80BQ9C086 356 aaPredicted RBP17.72■□□□□ 0.43
USB1-215ENST00000569252 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
USB1-215ENST00000569252 NPHP3-ACAD11A0A0J9YXS1 232 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 MYMKA6NI61 221 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 CCDC169A6NNP5 214 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 RSPH10B2B2RC85 870 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 SMC2O95347 1197 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 PARNO95453 639 aaKnown RBP17.71■□□□□ 0.43
USB1-215ENST00000569252 RSPH10BP0C881 870 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 CKBP12277 381 aa17.71■□□□□ 0.43
USB1-215ENST00000569252 NLRP11P59045 1033 aaKnown RBP17.71■□□□□ 0.43
USB1-215ENST00000569252 MRPS6P82932 125 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms