RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, human

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPHN-216	ENST00000557678	MAF	O75444	373 aa	Predicted RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	TOX4	O94842	621 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	ASL	P04424	464 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	CYP17A1	P05093	508 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	PTX3	P26022	381 aa	Predicted RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	BMS1	Q14692	1282 aa	Known RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	SF3A1	Q15459	793 aa	Known RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	TIGD7	Q6NT04	549 aa	Predicted RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	MRGPRG	Q86SM5	289 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	LILRB2	Q8N423	598 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	C7orf31	Q8N865	590 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	PLA2G15	Q8NCC3	412 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	ZG16B	Q96DA0	208 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	TTPAL	Q9BTX7	342 aa		4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	TNPO3	Q9Y5L0	923 aa	Known RBP	4.25	□□□□□ -1.73
GPHN-216	ENST00000557678	DVL2	O14641	736 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	MAFG	O15525	162 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	KCNQ2	O43526	872 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	JMJD7	P0C870	316 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	SLC9A1	P19634	815 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	MECP2	P51608	486 aa	Known RBP	4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	NPEPPS	P55786	919 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	BCAR1	P56945	870 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	SMAD3	P84022	425 aa	Known RBP	4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	ADCY2	Q08462	1091 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	ZNF460	Q14592	562 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	ZNF627	Q7L945	461 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	NME9	Q86XW9	330 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	DNAJC10	Q8IXB1	793 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	CLUHP3	Q96NS8	147 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	FAM193B	Q96PV7	902 aa	Predicted RBP	4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	UIMC1	Q96RL1	719 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	OSBPL2	Q9H1P3	480 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	TOMM22	Q9NS69	142 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	PODXL2	Q9NZ53	605 aa		4.24	□□□□□ -1.73
GPHN-216	ENST00000557678	JUN	P05412	331 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	VSIG10L2	P0DP72	767 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	GNAT2	P19087	354 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	PTGS2	P35354	604 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	NFE2L2	Q16236	605 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	CFAP100	Q494V2	611 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	GAGE13	Q4V321	117 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	FNDC3B	Q53EP0	1204 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	MFSD5	Q6N075	450 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	CLEC14A	Q86T13	490 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	LDLRAD3	Q86YD5	345 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	PHYKPL	Q8IUZ5	450 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	SYNE4	Q8N205	404 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	NKD2	Q969F2	451 aa	Predicted RBP	4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	MRFAP1L1	Q96HT8	127 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	CRAMP1	Q96RY5	1269 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	C14orf93	Q9H972	538 aa	Known RBP	4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	ZKSCAN5	Q9Y2L8	839 aa		4.23	□□□□□ -1.73
GPHN-216	ENST00000557678	XDH	P47989	1333 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	TMEM191C	A6NGB0	347 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	GOLGA6L6	A8MZA4	724 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	TRAF5	O00463	557 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	DNAJC8	O75937	253 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	IPO13	O94829	963 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	PRPF6	O94906	941 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	PEX11B	O96011	259 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	TGM1	P22735	817 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	NANOS3	P60323	173 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	PURA	Q00577	322 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	ADCY1	Q08828	1119 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	EPHA7	Q15375	998 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	BMP8A	Q7Z5Y6	402 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	CMTM4	Q8IZR5	234 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	JMY	Q8N9B5	988 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	HAS1	Q92839	578 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	C16orf92	Q96LL3	132 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	ZNF512	Q96ME7	567 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	MNT	Q99583	582 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	ELF4	Q99607	663 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	PRRX2	Q99811	253 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	NOL10	Q9BSC4	688 aa	Known RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	MYL10	Q9BUA6	226 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	MTG2	Q9H4K7	406 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	IFT57	Q9NWB7	429 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	DMRT1	Q9Y5R6	373 aa		4.22	□□□□□ -1.73
GPHN-216	ENST00000557678	FSBP	O95073	299 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	HK1	P19367	917 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	KIR2DL3	P43628	341 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	NEK4	P51957	841 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	SLC25A3	Q00325	362 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	TOB2	Q14106	344 aa	Predicted RBP	4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	MYBPC3	Q14896	1274 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	MAN2A1	Q16706	1144 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	RABL3	Q5HYI8	236 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	LAIR1	Q6GTX8	287 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	ZNF276	Q8N554	614 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	RTF1	Q92541	710 aa	Known RBP	4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	HIST1H2AH	Q96KK5	128 aa		4.21	□□□□□ -1.74
GPHN-216	ENST00000557678	HIST1H2AJ	Q99878	128 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms