RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 HDLBPQ00341 1268 aaKnown RBP4.74□□□□□ -1.65
FOXN3-217ENST00000557572 SRSF4Q08170 494 aaKnown RBP4.74□□□□□ -1.65
FOXN3-217ENST00000557572 NAIF1Q69YI7 327 aaPredicted RBP4.74□□□□□ -1.65
FOXN3-217ENST00000557572 KLHDC10Q6PID8 442 aa4.74□□□□□ -1.65
FOXN3-217ENST00000557572 IFNL3Q8IZI9 196 aa4.74□□□□□ -1.65
FOXN3-217ENST00000557572 CAGE1Q8TC20 777 aa4.74□□□□□ -1.65
FOXN3-217ENST00000557572 SREK1Q8WXA9 508 aaKnown RBP4.74□□□□□ -1.65
FOXN3-217ENST00000557572 ZBTB9Q96C00 473 aa4.74□□□□□ -1.65
FOXN3-217ENST00000557572 SLC7A6OSQ96CW6 309 aaPredicted RBP4.74□□□□□ -1.65
FOXN3-217ENST00000557572 KRTAP4-4Q9BYR3 166 aa4.74□□□□□ -1.65
FOXN3-217ENST00000557572 IL23AQ9NPF7 189 aa4.74□□□□□ -1.65
FOXN3-217ENST00000557572 BTBD7Q9P203 1132 aa4.74□□□□□ -1.65
FOXN3-217ENST00000557572 ARID4BQ4LE39 1312 aaPredicted RBP4.73□□□□□ -1.65
FOXN3-217ENST00000557572 H2AFYO75367 372 aaKnown RBP4.73□□□□□ -1.65
FOXN3-217ENST00000557572 MPIG6BO95866 241 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 HKR1P10072 659 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 HERVK_113P62684 666 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 TMED8Q6PL24 325 aaPredicted RBP4.73□□□□□ -1.65
FOXN3-217ENST00000557572 LINC00476Q8WZB0 136 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 ARL8AQ96BM9 186 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 ZNF512Q96ME7 567 aaPredicted RBP4.73□□□□□ -1.65
FOXN3-217ENST00000557572 COQ10AQ96MF6 247 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 C8orf37Q96NL8 207 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 IER2Q9BTL4 223 aa4.73□□□□□ -1.65
FOXN3-217ENST00000557572 B2RBV5 119 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 TRIM24O15164 1050 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 DDAH1O94760 285 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 ADAM8P78325 824 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 NHLH1Q02575 133 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 HSP90AA2PQ14568 343 aaPredicted RBP4.72□□□□□ -1.65
FOXN3-217ENST00000557572 ZNF425Q6IV72 752 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 KCNT2Q6UVM3 1135 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 EP400NLQ6ZTU2 488 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 ANKRD13AQ8IZ07 590 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 ST8SIA2Q92186 375 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 IPPKQ9H8X2 491 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 EIF2B4Q9UI10 523 aaKnown RBP4.72□□□□□ -1.65
FOXN3-217ENST00000557572 SRPK3Q9UPE1 567 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 INPP5FQ9Y2H2 1132 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 ATP23Q9Y6H3 246 aa4.72□□□□□ -1.65
FOXN3-217ENST00000557572 WDR91A4D1P6 747 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 C2orf78A6NCI8 922 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 TRIM38O00635 465 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 GNAT2P19087 354 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 SESN2P58004 480 aaPredicted RBP4.71□□□□□ -1.66
FOXN3-217ENST00000557572 FAM189BP81408 668 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 TCIRG1Q13488 830 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 FIGNQ5HY92 759 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 LARP1BQ659C4 914 aaKnown RBP4.71□□□□□ -1.66
FOXN3-217ENST00000557572 ARHGAP36Q6ZRI8 547 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 ARHGEF19Q8IW93 802 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 KIAA1586Q9HCI6 787 aa4.71□□□□□ -1.66
FOXN3-217ENST00000557572 ANKRD62A6NC57 917 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 IQCA1LA6NCM1 817 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 TMEM200CA6NKL6 621 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 AHRRA9YTQ3 701 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 PTTG1IPP53801 180 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 GIMAP6Q6P9H5 292 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 ARHGEF25Q86VW2 580 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 BCL6BQ8N143 479 aaPredicted RBP4.7□□□□□ -1.66
FOXN3-217ENST00000557572 GFM2Q969S9 779 aaKnown RBP4.7□□□□□ -1.66
FOXN3-217ENST00000557572 DUSP26Q9BV47 211 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 ADGRE3Q9BY15 652 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 KCNH6Q9H252 994 aa4.7□□□□□ -1.66
FOXN3-217ENST00000557572 PPP1R1BQ9UD71 204 aaPredicted RBP4.7□□□□□ -1.66
FOXN3-217ENST00000557572 GJB6O95452 261 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 MAP3K12Q12852 859 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 GPR19Q15760 415 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 NTRK3Q16288 839 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 DCAF17Q5H9S7 520 aaPredicted RBP4.69□□□□□ -1.66
FOXN3-217ENST00000557572 KRT40Q6A162 431 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 ALG1Q9BT22 464 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 AARSD1Q9BTE6 412 aaKnown RBP4.69□□□□□ -1.66
FOXN3-217ENST00000557572 HIRIP3Q9BW71 556 aaPredicted RBP4.69□□□□□ -1.66
FOXN3-217ENST00000557572 SLC46A2Q9BY10 475 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 NCDNQ9UBB6 729 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 ZNF70Q9UC06 446 aaPredicted RBP4.69□□□□□ -1.66
FOXN3-217ENST00000557572 MAGEL2Q9UJ55 1249 aa4.69□□□□□ -1.66
FOXN3-217ENST00000557572 C4BPAP04003 597 aaKnown RBP4.68□□□□□ -1.66
FOXN3-217ENST00000557572 TAF7LQ5H9L4 462 aa4.68□□□□□ -1.66
FOXN3-217ENST00000557572 VPS37DQ86XT2 251 aa4.68□□□□□ -1.66
FOXN3-217ENST00000557572 UBXN4Q92575 508 aa4.68□□□□□ -1.66
FOXN3-217ENST00000557572 OSBP2Q969R2 916 aa4.68□□□□□ -1.66
FOXN3-217ENST00000557572 ZNF669Q96BR6 464 aaPredicted RBP4.68□□□□□ -1.66
FOXN3-217ENST00000557572 ACBD3Q9H3P7 528 aa4.68□□□□□ -1.66
FOXN3-217ENST00000557572 CGB1A6NKQ9 187 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 CLASP2O75122 1294 aaKnown RBP4.67□□□□□ -1.66
FOXN3-217ENST00000557572 NDUFA10O95299 355 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 SSBP05455 408 aaKnown RBP eCLIP4.67□□□□□ -1.66
FOXN3-217ENST00000557572 NCLP19338 710 aaKnown RBP4.67□□□□□ -1.66
FOXN3-217ENST00000557572 GAGE13Q4V321 117 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 NAALADL2Q58DX5 795 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 TICAM2Q86XR7 235 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 SH2D3CQ8N5H7 860 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 ST13P5Q8NFI4 369 aaPredicted RBP4.67□□□□□ -1.66
FOXN3-217ENST00000557572 PSMD1Q99460 953 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 TRPM5Q9NZQ8 1165 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 DENND2AQ9ULE3 1009 aa4.67□□□□□ -1.66
FOXN3-217ENST00000557572 MARCH6O60337 910 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 NCR1O76036 304 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms