RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 A0A087WZ62 844 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 GRXCR2A6NFK2 248 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 ZNF623O75123 536 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 SLITRK3O94933 977 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 POLGP54098 1239 aaPredicted RBP14.09□□□□□ -0.15
SNX6-207ENST00000556303 PLCB3Q01970 1234 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 ST3GAL1Q11201 340 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 CAMK1Q14012 370 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 ZNF598Q86UK7 904 aaKnown RBP14.09□□□□□ -0.15
SNX6-207ENST00000556303 ABI1Q8IZP0 508 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.09□□□□□ -0.15
SNX6-207ENST00000556303 POF1BQ8WVV4 589 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 PSPC1Q8WXF1 523 aaKnown RBP14.09□□□□□ -0.15
SNX6-207ENST00000556303 C8orf76Q96K31 380 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 CASD1Q96PB1 797 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 FDXACB1Q9BRP7 624 aaPredicted RBP14.09□□□□□ -0.15
SNX6-207ENST00000556303 MRPL9Q9BYD2 267 aaKnown RBP14.09□□□□□ -0.15
SNX6-207ENST00000556303 CWH43Q9H720 699 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
SNX6-207ENST00000556303 ANKEF1Q9NU02 776 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
SNX6-207ENST00000556303 TMEM150BA6NC51 233 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 PPM1AP35813 382 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 PHKA2P46019 1235 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 TRAPPC10P48553 1259 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 GATMP50440 423 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 RAB27AP51159 221 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 NPEPPSP55786 919 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 POU5F1BQ06416 359 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 MXD4Q14582 209 aaPredicted RBP14.08□□□□□ -0.16
SNX6-207ENST00000556303 PLA2G4FQ68DD2 849 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 PTCRAQ6ISU1 281 aaPredicted RBP14.08□□□□□ -0.16
SNX6-207ENST00000556303 CCDC83Q8IWF9 413 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 TPH2Q8IWU9 490 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 LRRC43Q8N309 656 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 COLGALT1Q8NBJ5 622 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 FBXO18Q8NFZ0 1043 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 DYDC2Q96IM9 177 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 CDCA3Q99618 268 aaPredicted RBP14.08□□□□□ -0.16
SNX6-207ENST00000556303 KIF2CQ99661 725 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 EIF2AK1Q9BQI3 630 aaKnown RBP14.08□□□□□ -0.16
SNX6-207ENST00000556303 SH2D3AQ9BRG2 576 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 IFT122Q9HBG6 1241 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 CLDND1Q9NY35 253 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 RGL1Q9NZL6 768 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 WRAP73Q9P2S5 460 aaPredicted RBP14.08□□□□□ -0.16
SNX6-207ENST00000556303 PUF60Q9UHX1 559 aaKnown RBP14.08□□□□□ -0.16
SNX6-207ENST00000556303 C5orf42Q9H799 3197 aa14.08□□□□□ -0.16
SNX6-207ENST00000556303 FAM205CA6NFA0 338 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 DGAT1O75907 488 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 FGF18O76093 207 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 FGFR1P11362 822 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 HYAL1Q12794 435 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 CTTNQ14247 550 aaKnown RBP14.07□□□□□ -0.16
SNX6-207ENST00000556303 RABEP1Q15276 862 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 XKR9Q5GH70 373 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 CATSPER4Q7RTX7 472 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 FAM184AQ8NB25 1140 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 PRPF31Q8WWY3 499 aaKnown RBP14.07□□□□□ -0.16
SNX6-207ENST00000556303 MTRQ99707 1265 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 TLR9Q9NR96 1032 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 RNF19AQ9NV58 838 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 DAXXQ9UER7 740 aaPredicted RBP14.07□□□□□ -0.16
SNX6-207ENST00000556303 PRKAG3Q9UGI9 489 aa14.07□□□□□ -0.16
SNX6-207ENST00000556303 DTNBO60941 627 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 MUTP22033 750 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 DNAJB1P25685 340 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 LTBRP36941 435 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 TXKP42681 527 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 CYP4A11Q02928 519 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 KRT17Q04695 432 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 LAMTOR4Q0VGL1 99 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 ADAM15Q13444 863 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 EMC2Q15006 297 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 KCNT2Q6UVM3 1135 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 LRRC55Q6ZSA7 311 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 FERMT3Q86UX7 667 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 FAM178BQ8IXR5 827 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 MRPS27Q92552 414 aaKnown RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 PGBD4Q96DM1 585 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 ZNF668Q96K58 619 aaPredicted RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 NLRP4Q96MN2 994 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 ZNF558Q96NG5 402 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 C1QTNF1Q9BXJ1 281 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 NGRNQ9NPE2 291 aaKnown RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 AGPAT5Q9NUQ2 364 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 STK39Q9UEW8 545 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 PIN4Q9Y237 131 aaKnown RBP14.06□□□□□ -0.16
SNX6-207ENST00000556303 KIF3AQ9Y496 699 aa14.06□□□□□ -0.16
SNX6-207ENST00000556303 H3BQ06 376 aaPredicted RBP14.05□□□□□ -0.16
SNX6-207ENST00000556303 FSCN2O14926 492 aa14.05□□□□□ -0.16
SNX6-207ENST00000556303 ST18O60284 1047 aa14.05□□□□□ -0.16
SNX6-207ENST00000556303 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
SNX6-207ENST00000556303 ATF7P17544 494 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms