RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SLITRK3O94933 977 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 LYPLA2O95372 231 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 ITGB1P05556 798 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 XRCC6P12956 609 aaKnown RBP eCLIP12.72□□□□□ -0.37
BEST3-209ENST00000548658 LAG3P18627 525 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 TXKP42681 527 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 NPEPPSP55786 919 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 DRP2Q13474 957 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 GNL2Q13823 731 aaKnown RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 MXD4Q14582 209 aaPredicted RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 COL19A1Q14993 1142 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 RABEP1Q15276 862 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 PCBP1Q15365 356 aaKnown RBP eCLIP12.72□□□□□ -0.37
BEST3-209ENST00000548658 XKR9Q5GH70 373 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 PLA2G4FQ68DD2 849 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 PDE12Q6L8Q7 609 aaKnown RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 SRGAP1Q7Z6B7 1085 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 ECHDC2Q86YB7 292 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 FBXO18Q8NFZ0 1043 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 SPPL3Q8TCT6 385 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 DYDC2Q96IM9 177 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 MTMR9Q96QG7 549 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 KIF2CQ99661 725 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 EIF2AK1Q9BQI3 630 aaKnown RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 FDXACB1Q9BRP7 624 aaPredicted RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 ANKEF1Q9NU02 776 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 TYW1Q9NV66 732 aaKnown RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
BEST3-209ENST00000548658 KIF3AQ9Y496 699 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 XIRP2A4UGR9 3374 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 FSD2A1L4K1 749 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 DGAT1O75907 488 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 FGFR1P11362 822 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 TRAPPC10P48553 1259 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 GATMP50440 423 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 RAB27AP51159 221 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 CYP4A11Q02928 519 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 NCBP1Q09161 790 aaKnown RBP12.71□□□□□ -0.37
BEST3-209ENST00000548658 ST3GAL1Q11201 340 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.37
BEST3-209ENST00000548658 EP400NLQ6ZTU2 488 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 CATSPER4Q7RTX7 472 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 LRRC43Q8N309 656 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 POF1BQ8WVV4 589 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 PRPF31Q8WWY3 499 aaKnown RBP12.71□□□□□ -0.37
BEST3-209ENST00000548658 CCDC43Q96MW1 224 aaKnown RBP12.71□□□□□ -0.37
BEST3-209ENST00000548658 MRPL9Q9BYD2 267 aaKnown RBP12.71□□□□□ -0.37
BEST3-209ENST00000548658 CLDND1Q9NY35 253 aa12.71□□□□□ -0.37
BEST3-209ENST00000548658 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.37
BEST3-209ENST00000548658 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
BEST3-209ENST00000548658 ZNF623O75123 536 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 CSDE1O75534 798 aaKnown RBP12.7□□□□□ -0.38
BEST3-209ENST00000548658 SRGAP2CP0DJJ0 459 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 MCM7P33993 719 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 PPM1AP35813 382 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 FOSBP53539 338 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 PLCB3Q01970 1234 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 KRT17Q04695 432 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 POU5F1BQ06416 359 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 CAMK1Q14012 370 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 TFDP1Q14186 410 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 EMC2Q15006 297 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 CTC1Q2NKJ3 1217 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 TWF2Q6IBS0 349 aaKnown RBP12.7□□□□□ -0.38
BEST3-209ENST00000548658 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
BEST3-209ENST00000548658 RNF169Q8NCN4 708 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 ERMNQ8TAM6 284 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 MICAL1Q8TDZ2 1067 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 PGBD4Q96DM1 585 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 CASD1Q96PB1 797 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 MTRQ99707 1265 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 IFT122Q9HBG6 1241 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 NOL7Q9UMY1 257 aaKnown RBP12.7□□□□□ -0.38
BEST3-209ENST00000548658 PIN4Q9Y237 131 aaKnown RBP12.7□□□□□ -0.38
BEST3-209ENST00000548658 LZTS1Q9Y250 596 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 TCF20Q9UGU0 1960 aaKnown RBP12.7□□□□□ -0.38
BEST3-209ENST00000548658 NCOR1O75376 2440 aa12.7□□□□□ -0.38
BEST3-209ENST00000548658 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 FGF18O76093 207 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 FGFR4P22455 802 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 PHKA2P46019 1235 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 ALDH7A1P49419 539 aaKnown RBP12.69□□□□□ -0.38
BEST3-209ENST00000548658 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 LAMTOR4Q0VGL1 99 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 BMS1Q14692 1282 aaKnown RBP12.69□□□□□ -0.38
BEST3-209ENST00000548658 ZNF598Q86UK7 904 aaKnown RBP12.69□□□□□ -0.38
BEST3-209ENST00000548658 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
BEST3-209ENST00000548658 COLGALT1Q8NBJ5 622 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 RNF149Q8NC42 400 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms