RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 FUKQ8N0W3 1084 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 ADOQ96SZ5 270 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 TRIM39Q9HCM9 518 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 OAZ3Q9UMX2 235 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 B3GALT1Q9Y5Z6 326 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 RAD54L2Q9Y4B4 1467 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 URB2Q14146 1524 aaKnown RBP7.07□□□□□ -1.28
XRCC4-206ENST00000542685 KCNQ2O43526 872 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 AKAP8O43823 692 aaKnown RBP7.07□□□□□ -1.28
XRCC4-206ENST00000542685 RAPGEF3O95398 923 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 C6P13671 934 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 MSNP26038 577 aaKnown RBP7.07□□□□□ -1.28
XRCC4-206ENST00000542685 IRF9Q00978 393 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 MOGSQ13724 837 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 BMS1Q14692 1282 aaKnown RBP7.07□□□□□ -1.28
XRCC4-206ENST00000542685 TBR1Q16650 682 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 KANK2Q63ZY3 851 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 FILIP1Q7Z7B0 1213 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 CNPY4Q8N129 248 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 DLG3Q92796 817 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 PPP1R9BQ96SB3 815 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 SEMA4AQ9H3S1 761 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 GRPEL1Q9HAV7 217 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 POGKQ9P215 609 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 HDAC5Q9UQL6 1122 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 KIAA0556O60303 1618 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 RAPGEF6Q8TEU7 1601 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 KIAA1107Q9UPP5 1409 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 KIF15Q9NS87 1388 aa7.07□□□□□ -1.28
XRCC4-206ENST00000542685 A0A0G2JNJ9 132 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 ARHGAP6O43182 974 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 KRT37O76014 449 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 AMHP03971 560 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 SETQ01105 290 aaPredicted RBP7.06□□□□□ -1.28
XRCC4-206ENST00000542685 GABPB1Q06547 395 aaPredicted RBP7.06□□□□□ -1.28
XRCC4-206ENST00000542685 PCOLCEQ15113 449 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 CATSPEREQ5SY80 951 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 CTR9Q6PD62 1173 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 SASS6Q6UVJ0 657 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 RTKN2Q8IZC4 609 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 OR14A2Q96R54 314 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 MPHOSPH9Q99550 1183 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 VPS11Q9H270 941 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 Q9UFV3 132 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 FAM184BQ9ULE4 1060 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 ASB1Q9Y576 335 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 ABCC5O15440 1437 aa7.06□□□□□ -1.28
XRCC4-206ENST00000542685 TRPM1Q7Z4N2 1603 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 EIF2AK4Q9P2K8 1649 aaKnown RBP7.05□□□□□ -1.28
XRCC4-206ENST00000542685 MATN2O00339 956 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 PLD2O14939 933 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 NPTXRO95502 500 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 TACR2P21452 398 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 COMTP21964 271 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 MEOX1P50221 254 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 STAT5BP51692 787 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 PRKD1Q15139 912 aaPredicted RBP7.05□□□□□ -1.28
XRCC4-206ENST00000542685 CC2D1BQ5T0F9 858 aaKnown RBP7.05□□□□□ -1.28
XRCC4-206ENST00000542685 AGBL4Q5VU57 503 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 GRAMD4Q6IC98 578 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 USP30Q70CQ3 517 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 SLC16A11Q8NCK7 471 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 PUF60Q9UHX1 559 aaKnown RBP7.05□□□□□ -1.28
XRCC4-206ENST00000542685 TESMINQ9Y4I5 508 aa7.05□□□□□ -1.28
XRCC4-206ENST00000542685 PTPRGP23470 1445 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 UQCRHLA0A096LP55 91 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 GOLGA6L22H0YM25 854 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 M0R2C6 588 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 RAD17O75943 681 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 UQCRHP07919 91 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 SDHAP31040 664 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 HMGN5P82970 282 aaKnown RBP7.04□□□□□ -1.28
XRCC4-206ENST00000542685 NFYCQ13952 458 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 NFE2L2Q16236 605 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 TMEM200BQ69YZ2 307 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 TRIM68Q6AZZ1 485 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 DDX53Q86TM3 631 aaKnown RBP7.04□□□□□ -1.28
XRCC4-206ENST00000542685 OR14K1Q8NGZ2 314 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 CALML6Q8TD86 181 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 SREK1Q8WXA9 508 aaKnown RBP7.04□□□□□ -1.28
XRCC4-206ENST00000542685 CLUHP3Q96NS8 147 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 ZNF747Q9BV97 191 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 BOCQ9BWV1 1114 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 PLA2G12BQ9BX93 195 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 KIF3AQ9Y496 699 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 CDC42BPAQ5VT25 1732 aa7.04□□□□□ -1.28
XRCC4-206ENST00000542685 EIF4G3O43432 1585 aaKnown RBP7.03□□□□□ -1.28
XRCC4-206ENST00000542685 ARHGEF5Q12774 1597 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 BLMP54132 1417 aaPredicted RBP7.03□□□□□ -1.28
XRCC4-206ENST00000542685 RNF17Q9BXT8 1623 aaKnown RBP7.03□□□□□ -1.28
XRCC4-206ENST00000542685 ZBTB48P10074 688 aaPredicted RBP7.03□□□□□ -1.28
XRCC4-206ENST00000542685 RRP1P56182 461 aaKnown RBP7.03□□□□□ -1.28
XRCC4-206ENST00000542685 CCDC184Q52MB2 194 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 CRIP3Q6Q6R5 217 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 Q8N1X5 172 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 CFHR4Q92496 578 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 SCAND2PQ9GZW5 306 aaPredicted RBP7.03□□□□□ -1.28
XRCC4-206ENST00000542685 OR10A2Q9H208 303 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 SAMD15Q9P1V8 674 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 SRRDQ9UH36 339 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms